Rhododendron vialii: 131324337
Help
Entry
131324337 CDS
T09330
Name
(RefSeq) nuclear poly(A) polymerase 3-like
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
rvl
Rhododendron vialii
Pathway
rvl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
131324337
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rvl03019
]
131324337
Enzymes [BR:
rvl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
131324337
Messenger RNA biogenesis [BR:
rvl03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
131324337
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
MTPAP-like_central
PAP_RNA-bind
NTP_transf_2
Motif
Other DBs
NCBI-GeneID:
131324337
NCBI-ProteinID:
XP_058212258
LinkDB
All DBs
Position
4a:complement(43402694..43408393)
Genome browser
AA seq
530 aa
AA seq
DB search
MAYANRNQGVFIPYHQVVDLRSLNHPHVTIVPGPPIGLINPRIGPVGPPQFVPFGVTFNR
SFHELLIRMEEEKSRSLLQFMAGEGLVPSPEEEIKRKNAIEKLKQIVMEWIKRVACNRGL
DERRIPAASAAVLTYGSYGLGVHNSESDIDALCVGPRFATMGEDFFVVLHNMLTSRPEVS
EVHCVKDAKVPLMRFKLDGISIDLPYAQLKVMSVPENVDILNLYYLRNIDETSWRSLSGV
HANKWILRLIPNTKVFQSLLRCIKLWAKRRGVYGNLLGFFGGVHLAILGAFICQRYPNAR
LSGLISSFFGTFALWDWPKPIILQDGTLPISGSAAEPRSLMPIRLPCRPHEYCHSNITKS
TFYRIRVEFLRGHNLTKDLLRPDFDWGCLFEPFPYAKKYTQFLKVCLSASDQDELGEWVG
WVKSRFRSLLVKLEEIQGFCDPNPTEYVDANVAEPNTVFYWGLQSERSHFLDIKPVKDDF
VKSLSNGPTGKITLSVVQASQLPKNAQFDSESNKGYLNPNANLNYPIATG
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atggcgtacgcgaatcgaaaccaaggcgtcttcataccctaccaccaagtggttgatctt
cgctctttgaaccacccacatgtgaccatcgttcccggcccacccattggtctcataaac
cctaggattggcccagttgggccgccgcaatttgttccattcggtgttactttcaatcgc
tcttttcacgagttattgattcgaatggaggaggaaaagtcgcgatcgctgcttcagttt
atggcaggcgaaggacttgtgccatctccggaagaggaaattaagaggaaaaatgccatt
gagaagctcaaacagatagtgatggaatggattaagagggttgcttgcaaccgtggactt
gacgaacgccgcattccggctgcttctgccgcagtattaacttacggatcctatggcctt
ggtgttcataactcagagtcggatattgatgctttatgtgttggccctcgttttgctact
atgggagaggatttttttgttgtcctacacaacatgcttacaagcagaccagaagtatct
gaggtccactgcgttaaggatgcaaaagttcctctaatgcggtttaaacttgatgggatc
tcaattgatctgccgtatgctcaacttaaagtaatgtctgttcccgagaatgtggacata
cttaacctttactatctaagaaacattgatgaaactagctggagaagtttgtctggagtt
catgctaacaaatggattcttcggctaatcccaaacacgaaggtatttcaatcactgctg
cgatgtattaagttatgggcaaaaaggcgaggagtttatggtaatttgcttgggtttttt
ggaggagtccatttggccattcttggggcatttatttgtcaaagatacccaaatgcaaga
ttgagtggtttgatttcaagtttctttgggacgtttgccttatgggattggccaaagcca
attattctgcaagatgggactttgccaatttctggaagtgctgcagaaccgcggtccttg
atgcctattagattgccatgccgaccacatgaatattgccattccaacatcaccaagagc
acattttacagaatccgggtcgagttccttcgaggccataatttgactaaggatctcctc
agaccagattttgattggggttgcctatttgagccttttccatatgcaaaaaagtacaca
caatttctcaaagtatgtctttcggcctctgatcaagatgagttgggggaatgggttggt
tgggtgaagtcgcgattccgcagtcttcttgtcaagttggaggaaattcaggggttttgt
gatcccaaccctacagagtatgttgatgcgaatgttgcggagccaaacactgtgttctac
tggggcttgcaatcggaaaggagccatttcttggacattaagcctgttaaggatgatttt
gtcaagagcttaagtaatggcccaaccgggaagattacgctgtcagttgttcaagcatct
cagctacctaagaacgctcagtttgattctgaaagcaataaggggtacttgaaccctaat
gcaaatctcaattacccaattgccaccggatag
DBGET
integrated database retrieval system
