Rhododendron vialii: 131324772
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Entry
131324772 CDS
T09330
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 57
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
rvl
Rhododendron vialii
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rvl03009
]
131324772
Enzymes [BR:
rvl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
131324772
Ribosome biogenesis [BR:
rvl03009
]
Eukaryotic type
90S particles
Helicases
131324772
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GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
P-loop_SecA
T4SS-DNA_transf
ParD_antitoxin
UTP25_NTPase-like
Motif
Other DBs
NCBI-GeneID:
131324772
NCBI-ProteinID:
XP_058212864
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Position
4a:31156708..31170681
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AA seq
530 aa
AA seq
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MEKGTSFLFSGITFNRKKFSGDFEKFKEKNESNDLLSNEVSLIGSRNSEMDEITMPGKKR
KRKAMFLEPVEGFNVFKSSKSAAVTQENNQTEDEIAQGKKELYRKMERDALVRKKHNIHT
SGSNVPSPLQDFAELKSRYGCKRYLLRNFAELGFKEPTPIQRQAIPVLLSGRECFACAPT
GSGKTLAFVCPMLMKLKHASKDGVRAVILLPTRELAAQTARECKKLAKGKKFYIKLMTKQ
LVKSADFSKLHCDILISTPFRLQFAIRKRKLDLSRVEYLVLDESDKLFELDLVEQVDSVV
KACSNPSILRSLYSATLPDSVEELARTIMHDAVRIIVGRKNAASESIKQKLIFVGSEEGK
LLALRQSFAESWNPPVLVFVQNKERAKELYRELAFDNVRADVIHADLSQIQRENAVDNFR
AGKTWVLIATDVIARGMDFKGVNCVINYDFPDSAAAYIHRIGRSGRAGRSGEAITLYTES
DVPFLRNIANVMAASGCEVPAWIMSLPKKKWKKHRPRRDAILTKPKDEEE
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atggagaaaggaacctcttttctgttctctggcatcacattcaacagaaagaaattctcc
ggcgatttcgaaaagttcaaggagaagaatgaaagtaatgatttattaagtaatgaggtg
agcttgatcggaagccgaaacagtgaaatggatgagattacgatgccagggaagaagagg
aagaggaaggcgatgtttttggagccggttgaaggattcaatgtcttcaaaagctcaaaa
tcagcagctgtgactcaggagaataaccagactgaggatgagattgctcaagggaagaag
gaattatacaggaaaatggagagggatgcacttgtccgtaagaagcataacatacacact
tctgggagtaatgtcccatctcctctccaggattttgcagagttgaaatcaagatatggt
tgcaaacggtatttattacgcaattttgccgaactaggatttaaagagccaaccccaatt
caaaggcaggcgattccagtccttttatctgggcgggagtgcttcgcttgtgctccaact
ggttccggcaaaaccttggctttcgtttgtcctatgctaatgaaacttaagcatgcttca
aaggatggcgtccgggctgtgatccttttacctacacgagagctagctgctcagacagcg
agagagtgcaagaagttggctaaaggaaagaaattttatatcaagttaatgacgaagcag
cttgttaaaagtgccgatttttcaaaactgcattgtgatatattgatatcaacgcctttc
cgtttacagtttgccatccgcaaaagaaagcttgatttaagcagggttgaatatctcgtc
ctggatgagtcagataagttatttgaacttgacttggtggagcaggttgattcagtggtc
aaagcatgctcaaatccatctatattacgttcattgtatagtgctactttgcccgattca
gttgaagagcttgcacgcacgataatgcacgatgctgttcgtattattgttggcaggaag
aatgctgcttctgaatcaataaagcaaaaactgatttttgttggaagtgaagaggggaag
cttcttgctcttcgtcaaagctttgcagagagttggaatccaccggtgctagtttttgtt
caaaacaaggaaagggctaaggagctttacagggaactagcttttgacaacgtcagagct
gatgttatacatgctgatctctcccaaatacagcgagaaaatgctgttgataacttcagg
gctggcaaaacatgggttttaattgccactgatgttattgcccgggggatggatttcaaa
ggtgtcaattgcgtgattaactatgattttccggattctgcggcagcatacattcacagg
attggccgatcgggcagagctgggagaagtggagaggctatcactttatatactgagtct
gatgtaccatttttgagaaatatagccaatgtgatggcagcttctggctgtgaggttccc
gcttggatcatgtctttgcccaaaaagaagtggaagaagcacaggccacgaagagatgct
attttgaccaaaccaaaggatgaggaagaataa
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