Rhododendron vialii: 131325069
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Entry
131325069 CDS
T09330
Name
(RefSeq) light-mediated development protein DET1 isoform X1
KO
K10571
de-etiolated-1
Organism
rvl
Rhododendron vialii
Pathway
rvl04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
131325069
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rvl04121
]
131325069
Ubiquitin system [BR:
rvl04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
131325069
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Det1
Tryp_alpha_amyl
Motif
Other DBs
NCBI-GeneID:
131325069
NCBI-ProteinID:
XP_058213110
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Position
1a:13335619..13348479
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AA seq
532 aa
AA seq
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MFRRNNVTARIFEPNNVTARIFERQIRIPAPGTSIHCARRFYENLVPSCTIYDVECPDHS
FRKFTDDGQYLISFSRNHQDLIVYRPTWLTFSCKDEDCDTHDLPLKSKRFESFFTQLYCV
PLASSSEFICKDFFLYIESNQFGLFATSTTQIHDAPAAGGAIPGIPYIEKITFLLLRLED
GGILDERVFHNDYVNVAHSVGVFLYDDLLAIVSLRYQTIHILQIRDSGNLVDVRAIGEFC
REDDELFLNSNPLVAVNHIGNGLHHNQSILESSFLSGIKQRLLSFIFSGIWTEETDQTLR
IQCLKKKFYYHFQDYVDLIIWKVQFLDRQHLLIKFCSVDGGTSRSADHHPAFFAVYNMET
TEVIAFYQNSAEELYFLFEQFCDHFHATSSLSTTFITSHSNNIYALEQLRCNKKKANSLQ
QFVKKMLASLPFNCQSQSPSPYFDQSLFRYDEKLISATDRHRQSTDHPIKFIARRQQGSL
KFKIKPGPEAGSTDSRTKKISSFLFHPILPLALSIQQTLYLQPPVVNIHFRR
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atgtttaggcgaaacaacgtcactgccaggattttcgagccaaacaacgtcactgccagg
attttcgagcgacagattcgcattcccgctcccggcactagcattcattgtgccaggcga
ttttatgagaatcttgtgccaagctgtacaatatatgacgttgaatgtcctgatcattca
ttccgcaagtttactgatgatggtcagtacctcataagcttcagcagaaatcatcaggat
cttatagtttataggccaacatggttaacattttcttgcaaagatgaagattgtgatact
cacgatcttcccttgaaatcaaagaggtttgagagttttttcacacaactgtactgtgta
ccacttgcttccagcagtgagtttatatgtaaagatttcttcctatacatagagagtaac
caatttggactctttgcaacttcaactacacaaattcatgatgcacctgctgctggagga
gctattccaggaatcccttatattgagaagataacttttctccttttgagattggaagat
ggaggtatacttgacgagagggttttccacaatgattatgttaatgtggcccatagtgtg
ggtgtgtttttgtatgacgatttattggctatagtgtcccttcgttatcaaacgatacac
attctccaaatcagggactctgggaaccttgttgatgttcgagctattggggaattttgt
cgtgaagacgatgaactgtttctcaactccaatcctctggtggctgtaaatcatatcggg
aatggtctgcatcataatcaatcgatattggaaagctctttcctgagtggtatcaaacag
cgtttgctttcattcatatttagtgggatatggacagaagaaactgatcaaactctgaga
atccaatgcctgaagaagaagttttactatcattttcaagattatgtggatttgataatt
tggaaggtacaatttttagaccggcagcacctgctaatcaagttttgtagtgttgatgga
gggacgtcaagaagtgctgatcaccatcctgcattctttgctgtatataacatggagaca
actgaagtcattgcattttatcagaattctgcagaagagctctatttcttatttgagcag
ttctgtgatcacttccatgcaacgtcctcgttgtctacgactttcataacatctcattca
aataacatctatgctcttgagcaactaaggtgcaataaaaaaaaagccaacagcttacaa
cagtttgtgaagaagatgctggcttctttgcctttcaactgtcaatcgcaaagtccttcc
ccgtattttgatcaatctctctttcgatatgatgaaaagctgatttctgcaaccgaccgg
catagacagtcaacagaccatccaatcaagttcattgcaaggaggcagcaaggttccctc
aaatttaaaattaaaccagggccggaagccggtagcacagacagtcggacgaagaaaatc
tcctcattcttgttccatccaattttgccccttgctctctctatccaacagacattgtat
ttgcagccaccggttgtaaatattcacttccgcaggtga
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