Rhododendron vialii: 131325082
Help
Entry
131325082 CDS
T09330
Name
(RefSeq) uncharacterized protein LOC131325082 isoform X1
KO
K14311
nuclear pore complex protein Nup188
Organism
rvl
Rhododendron vialii
Pathway
rvl03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
131325082
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rvl03019
]
131325082
Messenger RNA biogenesis [BR:
rvl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
131325082
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
131325082
NCBI-ProteinID:
XP_058213125
LinkDB
All DBs
Position
5a:complement(7611752..7644496)
Genome browser
AA seq
1979 aa
AA seq
DB search
MATTTSTSTDQTKSVDASLWWDSFSLLLTELENASPSSDLPPHLVKKLKDNHAWFLDTVS
CFKPPNEKSREALNSRQVNAGSHKLTVEPELKDVALKISSILCLDEVQAYILVKRSIERS
TLVMDYLADELLHLVMLQYYIERQCLLKCTRQIVMHALYVGISKEGSAVMEEAQKLLSDG
LESRLHSNLEDLLSSSPPENMDVDLFTLWAEETLIEDNLVLDILFLAYYECHCRCTGKQW
KKLCSLYEGMISGSSNFGRLAMSTEALQSIYHAKVQLLLILIETLDLENLLQMIHDEMPF
SQGSTAFSLSDILELDATISSFSAFEEKETGPLILSWAVFLCLISSLPGKEETNVLMDID
HVGYVRQAFEVSSLSYFLEILQSDILKDSDGPIAGYRSVLRTFISAFIASYEISLQLEDN
TRNLILAIICKIYRGEESLCIQFWDKDSFIDGPIRCLLCNLEGEFPFRTVELVRLLSSLC
EGTWPAECVYNFLDKSVGISSVFEISNASLIDEVSQIVETSLPLSIPGVDGLLIPSNTRG
HILKVIDGNAALIRWEYGQSGVLVLLLRLAQKLYLDCTEEVLVTLDLLSRLVSFNMAVCH
GFLAIGNSQQLHGAGMNGHLEMHMCINVVDIMCTLVKKSSPNSSGAVMMSMGVNILAKML
KCSPSRIAAAALNTNIFDVALKMNPFNVRSNSLSSGSWLLSGRLANMLLIDCEHNDNCCQ
LTLSVLDFTMQLVQTGVENDVVLALVVFAFQYVLVNHEYWKYKLKHARWNVTLKVLKVME
MCILSIPYRPILGEVVRDILFCDSSIHSALFRVVCTTAQALEKLYVSRLYDPMEIEGLQL
AICSVLDILSSMLSYLSKNVLPSLPVFHQAVLSAANKPIPVVTAMISLLSYFRNPKIQVG
AAKVLSVLFVLADCTQPYVFGNAWFGLDEKQMMYLKRSLNRILCELSLLDEDLFVATCKL
LTSAAYYQPAFLVAVIAAKENIDVQSSNTTGLKPSNETTSGSLESAEANLLVAILQYVMQ
SDDLINSKPRILLNVLNFIKALWQAAAQFTSVLDRLRNSENFWRHLSSCFRKNATSSMEV
NLSENLTEEEVLSIAYRIQCQSVVLQILAFEMFLQKKLFHAEFAVKQTTESSKDRVWQAD
DTEKSNDAGLLGLKDVLSSFHEGLVLGNMIKSYASWEYDSDMYLRAKIAAALFSVHAMGK
LKNGDTGSLSVAVIEKTRILLKKLSELPSFSELVAQYTHRGHSEGKDMHGLIISDLYYHL
QAELEGRKIDPGPFKELSQYLLESNIVQTYRHKYEGDLFEHAKDVYLFDTLRLREELGFN
LWDYSDWKASKAAAETMLLCLQDVNYMVLLASSKLSALKSLITVLSTKEEDSSEKTTIGR
DIPQHQIHSCIDQVCQCLQSTIESLVPFPDISEDVLDFTATQAELLLLLIRYVGKSLPLP
VCVLVLKTSGSVLKVLNDFRPLVSGVKDTMKLLLMLLLSSVKSSCKSSQSGGAVEMESVE
AFPEVSNVSLGLLPILCHCTEPTDHCTLSLAIIDLVLKGFLTPNTWFPILKKHLRLQHLV
LKLQDRNLISSIPIILKFLLTVARVRDGATMLFTAGFLPSLKMLFSDLSVGNSSSIEIER
SNFLPPEKIEMPRDIWGLGLAVVTAMIHSLGDSSSGANIVDYVITYFILEKGYLISHYLN
APEFPFDDHDKKRARSQKTPTSLNALRETEHTLTLICELVKHRNSWMKAMKEMDSPLRER
SIHLLAFISRGAQNFRVAPLVCHPVLKEELKWCNEPSVINSRCGWFALTSIDCGLNPRFS
AASSKSTALVVKDQGSEVCQTYFSDTIAIQIYRIAFLILKFLCLQAECAIRRAEEVGFID
LAHFPELPMPEILHGLQDQGIAIVTEWCEANKTKQVSAQIQGIFVLLLHTTEMALYLEYC
VSQICEIRPVLGHVEDFSKGIKSLMKATEGHAFLKGSVKSLKHVVSFVFPGLLQTEGLL
NT seq
5940 nt
NT seq
+upstream
nt +downstream
nt
atggcgacaacaacttcaacttccaccgatcagaccaagtccgtcgacgcctcactctgg
tgggactctttctctctcctactcaccgagctcgagaacgcctctccctcgtccgacctc
ccacctcatctggtaaagaagctgaaggataatcacgcgtggttcctggacactgtttct
tgcttcaagccgccaaatgagaaatcaagggaggctttgaattcgcgccaagttaatgcg
gggtcgcataagttgactgtagagcctgaattgaaagatgtggcgctgaaaattagttca
attttgtgtctagatgaggttcaggcgtatattcttgtcaaaagatcgattgagcgcagc
actctagtcatggattatttagcggatgagcttcttcatttggtaatgcttcagtactac
attgaacgacaatgcttgttgaagtgtacacggcaaattgtcatgcatgccttgtatgtt
ggaatttccaaggaaggtagtgcagtaatggaagaggcacaaaagctgctttctgatgga
ctagaaagcagattacattctaaccttgaagatcttctgtcatccagtcctcccgagaac
atggatgttgaccttttcactttgtgggctgaggagacactaattgaagataatctagtc
cttgacatccttttccttgcatattatgagtgccattgtagatgtactggcaaacaatgg
aaaaagttgtgctcgctctacgaggggatgatatctgggtcttccaactttgggaggctg
gcaatgtcaactgaagcactgcaatccatttatcatgctaaagttcagttgctacttatt
cttatagaaaccttggacctggaaaatcttctccaaatgattcatgatgaaatgcctttc
agtcagggttctactgctttttccttgagcgacattctggaactggatgcaacaatttct
agtttcagtgcttttgaagaaaaagaaacagggccactaatactatcgtgggcagtattt
ctttgtctcatttcgtcgcttccagggaaagaggaaacgaatgtgctaatggacattgat
catgttggctatgtacgtcaagcatttgaggtttcatctttgagttattttcttgaaatt
cttcaaagtgatatattgaaagattcagatggtcctattgctgggtatcgaagtgtcttg
aggacatttatctcagcatttattgcatcttatgagatcagtctccagttggaggacaat
acccgtaatttaatattggctatcatttgcaaaatttatcgaggagaggagtcactttgt
attcagttttgggacaaggacagttttattgatggccctattcgttgccttctttgcaac
ctagagggtgaatttccctttaggaccgttgaacttgttcgcttattatcatccctctgc
gaaggaacttggcctgcagaatgcgtgtacaattttcttgataaatccgttggtatatca
tctgtgtttgagataagtaatgcttccttgatcgatgaagtttctcagattgttgaaact
tccctgcctttgagcattcctggggttgatggtttgttaatacccagtaatacacgtggt
catattttgaaagtgattgacgggaatgctgcacttatacgatgggagtatggacaatct
ggggtgcttgtgttgctcctgcgtttggcccagaagctgtatttggattgcactgaggaa
gttcttgttacgttagacttgcttagccgattggtatcctttaacatggctgtatgtcat
ggtttcttggcaattggaaactcgcagcaacttcatggtgctggcatgaatgggcattta
gagatgcatatgtgtatcaacgtggttgacatcatgtgtactttggttaagaaatcttct
ccgaatagcagtggtgcagtaatgatgtccatgggtgttaatatcttggcaaagatgttg
aagtgctcgccatctcgcattgcagcagcggctctaaacacaaatattttcgatgtagcc
ttaaagatgaaccccttcaatgtccgctctaatagtttatcaagtggctcgtggttgttg
tctggaagactcgcaaatatgcttctgattgactgtgagcacaacgataactgctgccaa
ttaactctttcagtgctagacttcacaatgcagcttgtccagacaggagtagagaatgat
gtcgtcctggctcttgttgtttttgcatttcagtatgtattagttaatcatgagtactgg
aaatacaagttgaagcatgctcgctggaatgtgacattgaaggtgcttaaagtgatggaa
atgtgcattttatcaatcccttatcgtccaatactgggtgaggtggttcgagatattttg
ttttgtgactcttccatccatagtgccctctttcgggttgtatgtacaactgcacaagcc
ttagagaaactctatgtcagccgtctttatgacccaatggagattgaagggttacagctg
gcaatatgttctgtgttggatattctttccagcatgctatcttatctttccaagaatgtt
ctgcccagccttcctgtcttccatcaagcagtgctgtcagctgcaaacaaaccaattcca
gttgttactgccatgatatccttgttgtcttacttccgcaatcctaaaatacaagtagga
gcagcaaaagtactgtcggtcttatttgttctcgctgactgtacgcagccatatgtgttt
ggaaatgcgtggtttggtttagatgaaaagcagatgatgtatcttaagcgttctctcaat
aggattctgtgtgagctgtctctcttggatgaagatctctttgttgctacatgtaaacta
ctcacttcggctgcatattatcagccggcttttcttgttgctgtaatcgctgccaaggaa
aatatagatgttcaatcaagcaataccactggtttgaagccatcaaatgaaacaactagt
gggtccctggaatccgcagaagcaaatcttttggttgcaattctgcaatacgttatgcag
tcggatgatcttatcaacagcaaacctcgcatactgctaaatgtgctaaattttattaag
gcattgtggcaagcagctgctcagttcacaagtgttttggaccgtctaagaaactcagaa
aacttctggagacatttgtccagctgttttcgtaaaaatgctacaagtagtatggaagtt
aacctgtctgaaaatctgactgaagaggaggttctgagcattgcgtaccgtattcaatgc
caatctgttgttctgcaaatactggcttttgaaatgttcctgcagaagaagttattccat
gcagaatttgctgtaaaacaaactacggaatcatcaaaggatagagtatggcaagcagat
gatactgaaaaatcaaacgatgcaggtctccttggtctcaaggacgtgttgtcaagcttc
catgaaggcttagttttaggcaacatgatcaagtcctatgcatcatgggaatatgatagt
gacatgtatcttcgtgcgaagattgctgctgctttattctctgtacatgcgatggggaaa
ttaaaaaatggtgatacggggagcttgtccgtagcagtaattgaaaagactcgcatcttg
ttgaaaaagttgagtgaactgccttccttttcagagttggtagctcaatatacgcatcgt
ggtcacagtgaaggaaaggatatgcacggattaataatcagtgatctttattatcatcta
caagccgagcttgaaggccgtaagattgatcctggaccattcaaagagctctcccagtat
ttgctcgaatcaaatattgtccaaacttatcggcacaagtatgaaggggatctttttgaa
catgccaaggatgtctacttgtttgacaccttacgtctccgagaagagttgggatttaat
ttgtgggactattccgactggaaagcatctaaggcagctgcagaaacgatgttgctctgc
ttacaggatgtgaattatatggtgttgcttgcaagttctaagctttctgcattgaaatct
ttgataaccgtcttatccacgaaagaggaagattcaagtgagaagacaacaattggtcgt
gacataccgcagcatcaaattcactcatgcatagatcaagtatgtcagtgtcttcaatcc
acgattgaatcattagttccatttcccgacatctctgaagatgtccttgatttcactgca
actcaagcggaactgcttctactccttatcagatacgtaggaaaaagtctgccgttgcct
gtttgtgtactggtcttaaaaacttcaggttctgttctcaaagtgttgaatgacttcagg
cccttggtttctggtgtgaaagatacaatgaagcttttacttatgctgcttctctcatca
gtcaagtcaagttgcaagagttcacagtcaggtggggcagtggagatggaatctgttgaa
gcctttcctgaggtgtccaatgtcagcttggggctactacccattctttgccactgcact
gaacccactgaccactgcaccctctccttagcaattattgacttggtattgaaaggtttc
ttgactcccaacacatggttccctatcttaaagaaacacctccggctgcagcatcttgtt
ctaaagcttcaagatagaaatttaattagttccattcccatcatattgaagttccttttg
actgttgcacgtgtgagagatggtgccacgatgcttttcacggctggttttcttccgtct
ctgaagatgttgttttctgacttgtcagttggtaactcttcctccattgaaattgaaagg
agcaattttttaccacctgagaaaattgaaatgcctcgagacatttggggacttggtttg
gcagtagtcactgcaatgattcactctttgggcgacagttcttctggtgctaatattgtt
gactatgtaatcacttactttatcttagaaaaaggttatctaatttctcactatcttaat
gcaccggagtttccattcgatgatcatgacaagaaaagggctcgatctcagaaaacacca
acttccctaaatgctcttagagaaacagaacatacacttacgcttatctgtgagctagtg
aaacaccggaattcatggatgaaggcaatgaaagaaatggattcacccttgagggaaaga
agtatacatttgttggcttttataagcaggggggctcaaaactttagagttgcacctctt
gtatgtcaccctgtcctcaaggaggagttgaagtggtgtaatgaaccatcggtaattaac
agcagatgtggctggtttgctcttacgtctattgactgtggattaaatcccaggttttct
gctgcttcatctaaatctactgccctagtagtcaaggatcaaggatctgaagtttgtcaa
acatatttctcagataccattgcaatacagatataccggatcgcttttcttattttaaaa
tttctttgtttgcaagctgaatgtgcaattcgaagggcagaggaggtggggtttattgat
cttgctcactttcctgagcttccgatgcctgagatattacatggcttgcaggatcaagga
attgcaattgtcactgagtggtgtgaagccaacaaaacgaagcaggtatcagctcaaatt
caaggtatctttgtcttgctgctacatacgacggagatggcattatacttggaatattgc
gtttcccaaatttgcgagataagacccgtgttgggacatgttgaagatttttctaaggga
ataaaatcgttgatgaaagctacggaggggcatgcgtttttaaaaggatcagttaagtcc
ttaaaacatgtagtatcctttgtatttcctggattattgcaaactgaaggactgttgtga
DBGET
integrated database retrieval system
