KEGG   Rhododendron vialii: 131325150
Entry
131325150         CDS       T09330                                 
Name
(RefSeq) squalene synthase 2 isoform X1
  KO
K00801  farnesyl-diphosphate farnesyltransferase [EC:2.5.1.21]
Organism
rvl  Rhododendron vialii
Pathway
rvl00100  Steroid biosynthesis
rvl00909  Sesquiterpenoid and triterpenoid biosynthesis
rvl01100  Metabolic pathways
rvl01110  Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:rvl00001]
 09100 Metabolism
  09103 Lipid metabolism
   00100 Steroid biosynthesis
    131325150
  09109 Metabolism of terpenoids and polyketides
   00909 Sesquiterpenoid and triterpenoid biosynthesis
    131325150
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01006 Prenyltransferases [BR:rvl01006]
    131325150
Enzymes [BR:rvl01000]
 2. Transferases
  2.5  Transferring alkyl or aryl groups, other than methyl groups
   2.5.1  Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
    2.5.1.21  squalene synthase
     131325150
Prenyltransferases [BR:rvl01006]
 Terpene biosynthesis
  Squalene/phytoene synthase
   131325150
SSDB
Motif
Pfam: SQS_PSY
Other DBs
NCBI-GeneID: 131325150
NCBI-ProteinID: XP_058213220
LinkDB
Position
5a:complement(8028699..8038074)
AA seq 429 aa
MGSLGAMLRHPDDVYPLLKLKMAMKHAEKQIPPEPHWAFCYTMLHKVSRSFGLVIQQLDT
NLRNAVCIFYLVLRALDTVEDDTSIATEVKVPILMAFHRHIYDRDWHFSCGTKEYKVLMD
EFHHVSTAFLELGRNYQEAIEDITMRMGAGMAKFICKEVETIDDYDEYCHYVAGLVGLGL
SKLFHASGSEDLASDSLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPRQIWIKYVHKL
EDLKYEENSVKAVQCLNDMVTNALIHMEDCLTYMAALRDPAIFRFCAIPQIMAIGTLALC
YNNVEVFRGVVKMRRGLTAKVIDRTSTMSDVYGAFFDFSCMLKSKVDKDDPNATKTLSRI
DGIQKTCRESGTLTKRKSYIIKSEPRYNSTLIFVLFIILAILFAYLSANRPTDMCKYFFF
TGEINSLYW
NT seq 1290 nt   +upstreamnt  +downstreamnt
atggggagtttgggggcgatgttgaggcacccggacgacgtgtacccgctgctgaagctg
aagatggcgatgaagcacgcggagaagcagattccgccggagcctcactgggccttctgt
tacaccatgcttcacaaggtctctcggagcttcggcctcgtgattcagcagctcgatacc
aatctccgcaacgccgtatgcattttttatttggttcttcgagccctcgacactgttgag
gatgatacaagcatagctacagaggttaaagtacctattctgatggcttttcatcgtcat
atatatgatcgtgactggcatttttcatgtggtacaaaggaatataaggttctcatggat
gagttccatcatgtttcaactgcttttttggagctcggaagaaattatcaggaggcaatt
gaggatataactatgagaatgggtgcgggaatggcaaaatttatatgcaaggaggttgaa
acaattgatgactatgacgaatattgtcactatgtagcaggacttgtggggttgggatta
tcaaagcttttccatgcctctgggtccgaagatttggcatcagattctctctccaattca
atgggcttatttcttcagaaaacaaacatcatccgagactatctggaggacataaacgag
ataccaaagtcgcgcatgttttggcctcgccaaatttggattaaatatgtccacaaactt
gaggacttaaaatatgaggaaaactcagtcaaagcagtgcagtgcctaaatgacatggtc
acaaatgctttgatacatatggaggattgcctgacatacatggcggctttgcgagatcct
gctatcttccgattttgtgcaatcccacagataatggcaattggaaccttagctttatgc
tacaacaatgttgaagtcttcagaggtgtcgtcaaaatgaggcgtggtcttaccgctaaa
gttattgaccggacaagcaccatgtcagatgtttatggagctttcttcgatttttcttgt
atgctgaagtcaaaggttgacaaggatgatccaaatgctacaaagacattgagcagaata
gatggaattcagaaaacttgcagggagtcgggaaccctaactaaaaggaaatcttacata
atcaagagcgagcccagatacaattcgactctgattttcgtacttttcattattctcgcc
atactgttcgcatacctatctgcaaaccgaccaacagatatgtgtaagtatttttttttc
acaggagaaattaattccttgtactggtaa

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