Rhododendron vialii: 131325268
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Entry
131325268 CDS
T09330
Name
(RefSeq) multisubstrate pseudouridine synthase 7
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
rvl
Rhododendron vialii
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rvl03016
]
131325268
Enzymes [BR:
rvl01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
131325268
Transfer RNA biogenesis [BR:
rvl03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
131325268
Prokaryotic type
131325268
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
PUS7L_N
R3H_PUS7L
Motif
Other DBs
NCBI-GeneID:
131325268
NCBI-ProteinID:
XP_058213405
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All DBs
Position
5a:31493770..31515974
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AA seq
696 aa
AA seq
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MKTLDEAEVGIFCYISQLPGFSGVLKQRYSDFIVNEVDLEGNVVHLTNLEAPSEIAEEKK
TKMSDQLNKSYDTELESFKSLTSDSDADCLKAFVNQISSGVKDSLSPIVLSPSSDKSHRT
AVHNFFKEHFTFLVTDTVDGPDTSSKCIRVWFNAGGNNGRGRNSRKRKDRGDKPYDNRGS
DNWPDHLGKFLRFHLYKENKDTQEALGLIGKMLGVQTRSFGFAGTKDKRAVSTQRVTVFK
QRASKLAALNERLFGIKVGDFCHVKEGLLLGQLYGNRFTVTLRSIVADSADTIKASADAL
GKHGFINYFGLQRFGSGSVPTHLVGATLLRGEWRKAVEMLLDPREGEKDSIQKVREYYKE
SNDIDGTLKQLPRHLVAERAILQCLKKCPGNYLQALKAIPRTLRMMYVHSYQSYLWNHAA
STRVQKYGIDQVVLGDLVYCKGDHREKVAATIHNSECEDDSCNDMNECSQLDEICETVFP
EEISNSVKAIGEDDLVAGNYTIEDVILPMPGSRVIYPLNEISKNFHDLAKKDDISLTESV
HSVKEFSITSMTGGYRRVFQKPMDFEWKLLTYTDGDIPLVETDLEIIAKSRTSSVVRKEY
PTDGSEEVKLPSNCTNQQESPEKNASSSSTYNSKAEDGDREVEVPQKPTVGFSNAEEAKT
ALQLSFTLPSSCYATMAIRELLKTSTSVAFHKTLNQ
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaccctagacgaagcagaagttggcatcttctgctatatctctcagcttccaggc
tttagtggcgttcttaaacaaaggtattctgatttcattgtaaatgaagtagatttggag
ggaaatgtcgttcatttaactaacttagaagccccatcagagattgcggaggaaaaaaaa
acaaagatgtctgatcagctgaataaaagttatgacaccgaacttgaatcatttaaatcc
ctcactagcgactctgatgctgattgtctcaaagcttttgtaaatcaaattagttccggt
gttaaagacagtctctcaccaattgttctttcgccaagttctgataaatcacatcggacg
gcagtgcacaattttttcaaggagcatttcacattccttgtcacagacaccgtagatggg
ccagacacctcatcgaaatgcattcgtgtgtggttcaatgcaggagggaataatgggagg
ggaagaaactctaggaaacggaaagataggggtgataagccttatgataacagaggttcg
gataactggccagaccatctcggcaagttccttaggttccatctttacaaggagaataag
gatacccaagaggcgttaggactgattggaaagatgctaggggttcagacaaggtcattt
ggatttgctggtacaaaagataagcgtgctgtatcgactcaaagggtaactgttttcaag
cagcgtgcaagtaaattagctgctcttaatgaaaggttgtttggtatcaaagttggtgac
ttttgccatgtcaaagaaggacttcttcttgggcagctgtatgggaaccgattcactgtc
acattaaggagtattgttgcagattctgcagataccattaaagcatctgcagatgcctta
ggaaagcatggatttattaactactttggtttgcaacggtttggaagtggctcagtgcca
actcaccttgttggagctacattacttagaggagagtggagaaaggcagtggaaatgctt
cttgatccgagagaaggggagaaggattcaatacagaaggtacgggaatattacaaagag
agtaatgatattgatgggaccttgaagcagttgccccgtcatctggtggctgaaagagcc
attctgcagtgtttgaagaaatgtcccggaaactacttgcaagctctaaaggctataccg
agaactctaagaatgatgtatgtgcatagctaccaaagctacttatggaaccatgcagca
agtacaagagtgcaaaaatatggaattgaccaagttgtgcttggagatttggtgtattgt
aaaggagaccatagggaaaaagtggcagcaacgatccataattctgaatgtgaagatgat
agctgtaacgacatgaatgagtgtagccaactagatgaaatatgcgaaacagttttccct
gaggaaataagcaactccgtgaaggctattggtgaagatgacttagtagctggaaactat
actattgaggatgttatccttcctatgcctggatcaagagtaatctatccgctgaatgag
ataagcaaaaattttcatgatttagccaagaaggatgatattagcttgaccgagagtgtt
catagtgtcaaggagttctcaataaccagtatgactgggggctataggcgagtttttcag
aaaccgatggactttgaatggaaactactcacatatacagacggagacataccgcttgtt
gagacagatttggaaattattgccaagtcaagaacgtcaagtgtggtcagaaaagagtat
ccaaccgatggaagtgaagaagtaaaacttccatctaactgcacaaatcaacaggagagt
cctgaaaaaaatgcttcatcatcttcaacgtataatagcaaggcagaagatggtgacaga
gaggtagaggtgccacagaagccaactgtaggtttctcaaatgctgaggaagcgaagacg
gctctccagttgagctttactcttccatcttcttgttatgcaacgatggccataagggag
ctgcttaaaacatctacatctgtcgcatttcacaaaaccttgaaccagtaa
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