Rhododendron vialii: 131325354
Help
Entry
131325354 CDS
T09330
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit A
KO
K07466
replication factor A1
Organism
rvl
Rhododendron vialii
Pathway
rvl03030
DNA replication
rvl03420
Nucleotide excision repair
rvl03430
Mismatch repair
rvl03440
Homologous recombination
rvl03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
131325354
03420 Nucleotide excision repair
131325354
03430 Mismatch repair
131325354
03440 Homologous recombination
131325354
03460 Fanconi anemia pathway
131325354
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rvl03000
]
131325354
03032 DNA replication proteins [BR:
rvl03032
]
131325354
03400 DNA repair and recombination proteins [BR:
rvl03400
]
131325354
Transcription factors [BR:
rvl03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
131325354
DNA replication proteins [BR:
rvl03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
131325354
DNA repair and recombination proteins [BR:
rvl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
131325354
MMR (mismatch excision repair)
131325354
DSBR (double strand breaks repair)
HR (homologous recombination)
131325354
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
Rep-A_N
REPA_OB_2
tRNA_anti-codon
DUF223
zf-like
Motif
Other DBs
NCBI-GeneID:
131325354
NCBI-ProteinID:
XP_058213548
LinkDB
All DBs
Position
5a:1233442..1237467
Genome browser
AA seq
630 aa
AA seq
DB search
MPVNLTHNAIPAIKAGDLNSKPLLQVLDIKLIGSQERYRFLVSDGASTQHAMIATQLNDR
VKTGRVRKGSVIQLIDYICSTVQSRKIIVVLNMETIIPDCETIGNPTMVVESDPGAQNRV
PDNSFGRPPVAINNSYSTNNKNTSARNAGNNMQSFPPTVQPPYQPPPNYKIHGAIMKNEA
PARIIPISALNPYQGRWAIKARVTAKGDIRRYNNARGDGKVFSFDLLDSDGGEIRATCFN
AVLDRFYEIIEVGKVYLISKGSLKPSQKNFNHLKNEWEIFLEATSTVDLCLDEDGSIPSQ
QFSFRSISEVEIAENNSIIDVIGIVTAVNPSVSIMRKNGMETQRRILNLKDQSTRSVELT
LWGDFCNREGQNLQEMVDSGFFPVLAVKAGKVNDFSGKSIGTISSTQLFINLDSSEAQSL
RIWFDRGGKNTTSQSISRDIIPGGPKNEIRKTVSQIKDEGLGRSDKPDWITVKATISFIK
TDTFCYTACPLMIGDRQCNKKVTRSGNSRWQCDRCNQEIEECDYRYLLQAQVQDNTGLTW
VTAFQESGEEILGCPAKDLYFLKYEEEDDVKFAEIIRGSLFAEYLFRLKIKEELYGDEQR
VKITVVKAEKVNYSAESKHMLDLIAKVHYR
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atgccggtgaatctgacgcacaacgcgatcccggcgataaaggcgggagacctgaactcg
aagccgttgcttcaggtactggacatcaagctcatcggtagccaggaacggtaccgtttc
cttgtttccgacggcgcgtcgactcagcacgcgatgatcgcgactcagctcaacgaccga
gtcaagacggggcgagtccgcaagggctccgtcatccagctcatcgattacatatgtagc
accgttcagagtcgcaagattattgtagttctaaacatggaaactattataccagattgt
gaaacaattgggaatccaacaatggttgtagaatctgatccgggagctcaaaaccgagtg
cctgataacagctttgggcgcccccctgtggctatcaataatagttatagtaccaataat
aagaacacgagtgcccgaaatgcaggaaacaatatgcagagtttccctccaactgttcaa
cccccataccaacctcctccaaattacaaaatccatggtgcaatcatgaagaatgaggca
ccagcacgcataataccaatttctgctttgaatccttatcaaggtcggtgggcgattaag
gcaagagtgactgcaaaaggagacatccgcaggtataacaatgcccgtggagatgggaag
gtgttctcctttgaccttcttgattctgatggtggtgaaattcgagccacctgtttcaat
gctgttcttgaccgcttctatgaaataatcgaggttggaaaagtctatttgatatcaaag
ggtagcttgaaaccatcacagaagaacttcaaccatctaaaaaacgaatgggagatattt
ttggaagcaacttcaacagtcgatctttgcctggatgaagatggttcaataccaagccaa
caattctccttccgatccatcagtgaagttgagattgctgaaaataattccattatagac
gtcataggtattgtaacagctgtaaacccctcagtctctatcatgcgaaaaaatggtatg
gaaactcagagaagaattctgaatctaaaggaccaatcaacgcggagtgtcgaattgact
ctatggggtgatttctgcaatagggaaggtcaaaatctgcaggaaatggtcgactctgga
tttttcccagttttagccgtcaaagctgggaaagttaatgacttcagtgggaaatctata
gggacaatttcgtctacccagctcttcatcaacctggattcctcagaggctcaaagcttg
aggatttggtttgatcgaggcgggaaaaacaccacatctcaatccatctctagagacatc
attccaggaggccctaagaatgagatacgtaaaactgtgtcccaaatcaaggacgaaggg
ctgggaagatcagataaaccagactggattactgtgaaagcaaccatatctttcatcaaa
acggacacattttgctacacggcttgtccattgatgattggagataggcagtgtaataag
aaagtgaccaggtcaggaaattcaaggtggcaatgcgaccggtgtaatcaggaaatcgag
gagtgtgattacaggtaccttcttcaagctcaagtacaggacaacactgggttgacatgg
gtaacagcttttcaggaatctggtgaagagattttgggttgtccggctaaggatttgtac
tttttgaaatacgaagaggaggatgatgttaagttcgcagaaatcatccgtggaagcctc
tttgcagaatatctttttaggctgaaaatcaaagaggaattgtatggtgatgaacagagg
gtgaagattacagtggttaaggcagagaaggtgaattattctgcggagagcaaacacatg
cttgatttgattgctaaggttcattatcgctga
DBGET
integrated database retrieval system
