Rhododendron vialii: 131325376
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Entry
131325376 CDS
T09330
Name
(RefSeq) pre-mRNA cleavage factor Im 25 kDa subunit 1 isoform X1
KO
K14397
cleavage and polyadenylation specificity factor subunit 5
Organism
rvl
Rhododendron vialii
Pathway
rvl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
131325376
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rvl03019
]
131325376
Messenger RNA biogenesis [BR:
rvl03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
131325376
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GFIT
Motif
Pfam:
NUDIX_2
NUDIX
Motif
Other DBs
NCBI-GeneID:
131325376
NCBI-ProteinID:
XP_058213581
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Position
5a:1424663..1430693
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AA seq
256 aa
AA seq
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MGDERALPVVDTDRTHGSNVLDIYPLGCYYFGSTRALPFKDETLSDRLHRLKSNYAAHGM
RTCVKAVILVELFKHPHLLLLQVRNSLFELPGGRLRPSESEVDCLKRKLSSKLSVDEEGS
VLEWEVGECIGMWWRPDFETLMYPYLPPNVKRPKECTKLFLVKLPESRKFIVPRNYKLLA
VPLSQIHENNKLQESLDLKLLSRENCDGSAFLLRLDRITKGNGGLQFSNISHLNINPPAK
GRRKMVESRLRVALRG
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atgggcgatgaaagggctctaccggtggtcgatactgatcgaactcacggcagtaacgtc
ttggacatttaccctcttggctgttactacttcggctccacccgagccctccctttcaag
gacgagaccttgtccgatcgcctccaccgtttgaaatccaactatgctgctcacgggatg
aggacttgtgtgaaggcagttattctggttgaattgtttaaacacccccatctattactc
ttgcaagtacgcaattcattgtttgagctccctggaggtcgcttacgaccaagtgaatca
gaagttgattgtctaaaacgcaagctttcaagtaagctatctgttgatgaagaaggaagc
gtccttgaatgggaggtgggagaatgcattggaatgtggtggaggcctgactttgaaacc
ttgatgtacccatatttaccaccaaacgtgaaaaggcctaaggaatgtacaaagctcttt
cttgtcaagctaccagaaagtcgaaaattcattgtaccaagaaactataaattgcttgcc
gttccattgagccaaattcatgaaaacaacaagttgcaggaatcgcttgacttgaagctg
ctctcccgtgagaattgcgatgggagtgcattcctgttgagactggatcgcattactaag
ggaaatgggggcttacagttctccaatatctctcacctcaacataaatccccctgcgaaa
ggtagacgaaagatggttgaaagtcgcctcagagtcgccctacgaggttga
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