Rhododendron vialii: 131325490
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Entry
131325490 CDS
T09330
Name
(RefSeq) putative RING-H2 finger protein ATL12
KO
K10664
E3 ubiquitin-protein ligase ATL6/9/15/31/42/55 [EC:
2.3.2.27
]
Organism
rvl
Rhododendron vialii
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rvl04121
]
131325490
Enzymes [BR:
rvl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
131325490
Ubiquitin system [BR:
rvl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
ATL proteins
131325490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-ANAPC11
zf-C3HC4_3
zf-RING_5
zf-RING_UBOX
zf-RING_16
Prok-RING_4
zf-HC5HC2H
DUF7649
zinc_ribbon_16
zf-RING-like
TctB
Motif
Other DBs
NCBI-GeneID:
131325490
NCBI-ProteinID:
XP_058213769
LinkDB
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Position
5a:5120873..5122986
Genome browser
AA seq
429 aa
AA seq
DB search
MFSKPQIFPMNQSVFLLLLLLSVLCFVQAQSAPGQSSNFQPSLAVVIGIMAIMFSLTFIL
IVYAKFCHEPANAHNDREAVQSPQIPNGFVRQNSLYRGIDKTVIESIPFFRFSSLRGSRR
GLECVVCLSKFEDVEILRLLPKCKHAFHIGCIDEWLEKHSSCPLCRVKISADDLATITYT
DSMRFLSSQVEVVNQVIDDPGVQLYVQREGSSRSWSSRFRNSLRRSGSGVMKHEELPIRE
NDGAVDKEDSSMHKFNHKIIVSDVVLKKRWSYLSSSDLAKLNSEMLGDVSRKRFSCLDTN
TLENSTTWATEEGGIRSEINEETGRKTGFEPKVGKLNRNNSFPSSSDADSSNQSRVLNTN
DRRSMSEITVFSRFKRNGNARESPVAQNGGKEERLKRLWQPIAERTVRWYGDRDKRSQQS
NNMRESLNV
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgttttccaagcctcaaattttccccatgaatcaatcggttttcctccttttacttctc
ctttcggttctctgcttcgtccaggcacaatctgccccgggccagagcagcaatttccaa
ccaagcctggcagtggtaattggaatcatggctataatgttttcattaacattcatcctc
atcgtatacgcgaagttctgccacgagccggccaatgctcacaacgatcgcgaagccgtc
caaagtccccagattcctaacggattcgtgagacagaattcgctgtatcgtgggatcgat
aaaacggtgatcgagtccatacctttctttcggttctcttcccttagagggtcgaggaga
gggctggaatgcgtggtttgtctctccaaattcgaagacgttgagatccttcgattattg
ccaaagtgcaagcacgccttccacatcggttgcatcgacgagtggctggaaaagcactcg
agctgccctctctgtagggtcaaaatctccgcggatgatcttgctacgataacgtacacg
gatagcatgaggttcttgtcgagccaggtagaggtggtgaatcaggtgatagacgacccg
ggcgtgcagctttacgttcagagggaaggcagcagtcggtcctggtcttcgagatttcga
aacagcttgaggagatcgggcagcggtgttatgaagcacgaggaactgccaatcagagaa
aacgacggcgctgtcgacaaagaagacagctccatgcataagttcaaccacaagatcatt
gtgtcggatgtcgtgctgaagaagaggtggagctatcttagttcctccgaccttgcgaag
ttgaattcagaaatgcttggcgatgtctcacgcaagaggttttcttgtcttgatacaaac
acactagaaaactcgacgacatgggcgactgaagagggcggaatccgatcggagatcaat
gaggagacggggaggaaaacgggtttcgaacccaaggttggtaagttgaatcggaataat
tcgttcccatcatcgagtgacgctgattcttcgaatcaatcgagagttttgaacacgaat
gacaggagatcgatgtcggagattactgttttttcaagattcaagaggaatggcaatgca
agggaatcccctgttgctcaaaatggtggaaaggaggagagattgaagaggctttggcag
ccgattgcggaaagaacagttcgatggtatggtgatagagacaagagatctcaacagtcg
aataacatgagagaatcgttgaatgtctaa
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