Rhododendron vialii: 131325497
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Entry
131325497 CDS
T09330
Name
(RefSeq) putative RING-H2 finger protein ATL12
KO
K10664
E3 ubiquitin-protein ligase ATL6/9/15/31/42/55 [EC:
2.3.2.27
]
Organism
rvl
Rhododendron vialii
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rvl04121
]
131325497
Enzymes [BR:
rvl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
131325497
Ubiquitin system [BR:
rvl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
ATL proteins
131325497
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-rbx1
zf-C3HC4
zf-ANAPC11
zf-C3HC4_3
zf-RING_5
zf-RING_UBOX
BPD_transp_2
zf-RING_16
RING_XB3-XBAT31
DUF4064
Prok-RING_4
zf-RING_4
zf-RING-like
DUF6097
DUF6594
zf-C3H2C3
Tmpp129
Motif
Other DBs
NCBI-GeneID:
131325497
NCBI-ProteinID:
XP_058213775
LinkDB
All DBs
Position
5a:complement(5160114..5161754)
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AA seq
434 aa
AA seq
DB search
MNQLILLFSLLLSIFCYVEAQAQSPSNQNNSTSSQNTFNNFQPSIAVVLVILVILILVSI
VLAMYTKFGRRIGVLPDNNRQTLTGLMRPGAISSGIDRIVIESLPFFKFSSLKGLRGGLE
CAVCLSKFEDVEVLRLLPKCKHAFHINCVDQWLENHSSCPLCRQKISVDDLTYSNSMRFM
SSQSEVRGDSNVELFVQREDSRRHGSSRFSIGGSFRIFEKGVVKEDELPIREDCEGVEED
DKFFHKFNHKIIISDAVQTKNTNAVLKSRWSNLSSSDLLFLNSEMLGDVSSNRFPPLDSN
TREYSTTRATEEGGISKIKEEMERKRDFETKVGVLNQNDSYPLSSGGNTSNPKRNLHPNE
KRSMSEIAVHSRFKEANTRGNGVVMESSVPDNAAKEERLKRLWLPIARRTVQRYANRDKK
SQQSDYNTRQSMNV
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaattgattctcctcttttcacttctgctttctattttctgctatgttgaagca
caagcacaatcaccctcgaaccagaacaactcgacttcttcgcaaaatacattcaacaat
ttccagccgagcattgcggtagtacttgtgatcttggttatattgattctagtgtccata
gtcctggctatgtacacgaaattcggccgcaggatcggtgtacttcccgacaacaatcga
caaactctaaccgggttaatgagaccgggtgcaatatcatccgggatcgataggatagtg
atcgagtcgcttccgtttttcaagttctcttccctcaaagggctaaggggagggctggaa
tgcgcggtttgtctctccaaattcgaagacgttgaggttcttcggttattgcccaagtgc
aaacacgcgtttcacatcaattgcgtcgatcagtggctagaaaaccactccagttgtcct
ctttgcaggcagaaaatcagcgtggatgatttaacgtactcgaatagtatgaggtttatg
tcgagccagtcggaggtgaggggggactcgaacgtggagctgtttgttcagagggaggac
agtcgccgacatgggtcttccagatttagcattggaggcagttttaggatattcgaaaag
ggtgtcgtaaaggaagatgagttgccaatccgagaagattgcgaaggcgttgaggaagat
gataagtttttccataagttcaatcacaagatcattatctccgatgctgttcaaacgaaa
aatactaatgctgtgctgaagagcaggtggagcaatcttagttcctccgaccttctgttc
ttgaattcagaaatgctcggcgatgtctcgagcaataggtttcctcctctggattcaaac
acgcgagaatactcgactacacgggcgactgaagagggtggaatctcgaagatcaaggag
gagatggagaggaaaagggatttcgaaaccaaggttggtgtgttaaaccagaacgattca
tacccattatcaagtggaggtaatacttcaaatccaaagagaaatttgcatccgaacgag
aagagatcgatgtcggagatagccgttcattcgagattcaaggaagccaatacgaggggt
aatggtgtagtcatggaatcctctgttcctgataatgctgccaaggaggaaagattgaag
aggctttggttgccgattgcgcgaagaacggttcaacggtatgctaatagagataaaaag
tctcaacaatcggattataacacaagacaatcaatgaatgtgtag
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