Rhododendron vialii: 131325607
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Entry
131325607 CDS
T09330
Name
(RefSeq) nuclear pore complex protein NUP98A-like isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
rvl
Rhododendron vialii
Pathway
rvl03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
131325607
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rvl03019
]
131325607
03036 Chromosome and associated proteins [BR:
rvl03036
]
131325607
Messenger RNA biogenesis [BR:
rvl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
131325607
Chromosome and associated proteins [BR:
rvl03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
131325607
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin2
Nup98_GLEBS
Motif
Other DBs
NCBI-GeneID:
131325607
NCBI-ProteinID:
XP_058213919
LinkDB
All DBs
Position
5a:26529435..26537990
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AA seq
960 aa
AA seq
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MHTHKQSHRHNTPISLRISSSAPFTHPSFSLRFGSRINPIPLLFSSSCRNTFLKMFGSTT
HFGQSSNGSFGSRSGFGQNSNASSNLFASNPFGSSTPFGSSTGGSVFGGTSTDVFGVNSP
PGQFRQSTFGSQLPPAFGTSTAAFGAPSAPAFGTSSSSGAFGLSSNAPFGASSVFGQNSN
TSNPFTAKPFGSTTTFGTPTGGSVYGGTSTGVFGLNSPSLGQQSTYGSPSPPAFGTSTVA
FDTPLAPSFGTSSSSFGGPSIFGVKPPFGGFASSPNQSTSFGSAFEQAQTTIGTNPFGSS
SSFSASIQNAFGSSSTSGSTPATSFAFGTGGAFNAAKPLGPSSTNGWGVSTGTGPSFFGT
QSSSGGQSTTSTFSFGRQQRGSRLAAYTATASEAVEGGSLRSISGMHINKDKNHEELRWE
DYQSGDKGGMGTGGFTIQSNSFAHPPPSTFTSLPFNTSPSVNSVMTTSSSAPYQFVAPPI
SAFSWNPTSGLYSANTQPSPVSQSVVTLPVTSSFSSNVPPVEFTSGVSSANTQPSPVLLS
VVPLPQTSSFQGLVPPVSQPNVSSESSMPPMGNQPDLSQTTPFLTTPLQPTQTAQTGAFA
NSEFPWSSAGLSGFADTAGVLGQSIFSLPSCTQNTEVAQPVPCQLSISHLGSTPPICYGI
SNMPVLDKPAATVRVSSLLTSRHLSHRRIRLPARKYDPKSDGPKVPFFSDNEGLPPAAKG
GAVFFRRENPRALVVLPAEQWPQRFDTEKMSQLVHASLHVYKNGTISAEVSAPALVNGSL
CQYEDDHLVENTKSNHERKEHVTDVEASMPRLSCSDYYTEPQVPELAANERAEPGFCHHV
KNFVVGRHGYGSITFLGETDVRHLDLDSHVKFNNREVMVYMDERDKPPVGEGLNKAAEVT
LLNVKCIDKMGNRYINGPKVDKYREMLIKKAKEQGAEFVSYDPVEGEWKFRVQHFSRYGF
NT seq
2883 nt
NT seq
+upstream
nt +downstream
nt
atgcacacacacaaacaatcacacagacacaacactccaatttcactccgaatctcttcc
tcggcgccttttacacatccatctttttcgcttcgtttcggcagcagaatcaatccaatc
cccttattattctcgtcttcttgtcggaatactttcctcaagatgttcgggtccaccact
cactttgggcagtcttccaatgggtcatttgggtcccgatcgggtttcggacagaacagc
aatgcaagtagcaatctatttgcttccaatccatttgggagttcaactccttttggttca
tctacaggaggttcagtatttggtggaacttccacggatgtgtttggagtaaattctccg
ccaggtcaatttcgacagtcaacatttggttcccaattgcctcctgcttttggaacttca
acagctgcttttggtgctccctcagcccctgcttttgggacctcatcgtcatccggtgca
tttggattgtcatctaatgccccatttggggcctcatcagtttttgggcagaacagcaat
acaagtaatccattcactgccaagccatttgggagtacaactacttttggtacacctaca
ggaggatctgtatatggcggaacttcaacgggtgtgtttggcctaaactctccgtcctta
ggtcagcagtcaacatatggttccccgtcgcctcctgcttttggaacttcaacagttgct
tttgatactcctttggccccttcttttgggacctcttcatcatcttttggtggaccttct
atatttggcgtgaagcctccttttggaggatttgcatcaagccccaaccaatctacctca
tttgggagtgcgtttgaacaagcccaaactactattgggaccaatccatttggttcgtct
tcttccttcagtgcatcaatccaaaatgcatttggctcctcatctacctcaggcagcaca
cctgcaacatcttttgcatttggaaccggtggtgcattcaatgctgcaaaaccattggga
ccatcaagtaccaatggttggggggtatcaactggtactggtccatctttttttgggact
caaagttcctctggaggtcagtccacaacctcaacattttcttttggacgtcaacaaaga
ggaagtagattagcagcgtacactgcaactgcatctgaagcagttgaaggcggcagtctg
cggtccatttcaggcatgcacattaacaaagacaaaaaccatgaagaattgaggtgggaa
gactatcagtccggagacaaaggtgggatgggaactggtggtttcacaattcagtcaaac
tcctttgctcacccgcccccttctacattcacttcattaccttttaacacatccccatct
gttaactctgtgatgacaacatcatcctctgcaccttaccaatttgtagcaccaccaatc
tcagcattttcctggaatcctacttcaggcttgtattctgctaacacacaaccatcccca
gtatctcagtctgttgtgacgcttccagtgacttcttcattttcaagcaatgttcctccg
gttgaatttacctctggcgtgagttctgccaacacacaaccatccccggtattgctgtct
gttgtgccgcttccacagacttcctcatttcaaggccttgttcctccggttagtcaaccc
aatgtatccagtgaatcatctatgcctcctatgggcaatcaacctgatcttagtcaaaca
actccatttttaaccactcctttgcagccaactcaaacagctcagacaggtgcttttgct
aatagcgagtttccttggtcatcagcaggtttaagtggatttgcagacaccgcaggagtt
cttggacagagcatcttcagtctaccgtcttgtactcagaacactgaggtagcgcagcca
gtaccttgtcagctgtcaattagtcaccttggttccacgcctccaatttgctatgggatt
tctaacatgcctgtgcttgataaacctgctgctactgtcagagtgtcatccttgctgaca
tctcgacacttgtctcacagaaggatcaggttaccagcccgaaaatatgatcctaaaagt
gatggcccgaaggtgccatttttcagcgacaacgaaggactgcccccagcagctaaggga
ggtgctgtattttttcgaagggagaatcctagagctttggtggttcttccagctgaacag
tggccacagaggtttgacaccgagaaaatgtctcaactggtgcatgcatctttgcatgtg
tacaagaatggtacaatctccgcagaggtttctgcacctgctttagtaaatggttctttg
tgtcagtatgaagacgatcatttggttgaaaataccaaatccaatcatgagcgcaaggaa
cacgtgactgatgtggaggcatcaatgccacgactcagttgctctgattactacacagaa
cctcaagtccctgagttggcggcaaatgaaagggcagaaccaggattctgccatcatgtg
aagaatttcgtggtgggacgtcacggctatggaagcataacgtttttgggagagacggat
gtgaggcaccttgatttggattcacatgtcaagtttaataaccgtgaagtgatggtatat
atggatgagagagacaaaccaccggtgggagaaggtctcaacaaggctgcggaggtgact
cttctcaacgtgaagtgcattgataagatggggaatcggtatataaatggtccaaaggtg
gataaatacagagagatgctaatcaagaaagcgaaagagcaaggcgccgagtttgtttct
tatgatcctgtggaaggggagtggaaattcagagtccagcacttcagccgatacggattt
tga
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