Rhododendron vialii: 131325804
Help
Entry
131325804 CDS
T09330
Name
(RefSeq) transcription factor IIIB 60 kDa subunit isoform X1
KO
K15196
transcription factor IIIB 90 kDa subunit
Organism
rvl
Rhododendron vialii
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rvl03021
]
131325804
Transcription machinery [BR:
rvl03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
131325804
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
BRF1
Zn_Ribbon_TF
Lar_restr_allev
TFIIB_C_1
Zn_ribbon_3
BRF2-like_C_cyclin_rpt
DmmA-like_C
Motif
Other DBs
NCBI-GeneID:
131325804
NCBI-ProteinID:
XP_058214234
LinkDB
All DBs
Position
5a:3591372..3603931
Genome browser
AA seq
636 aa
AA seq
DB search
MGWCPHCKENHPTHRDYDTGTMISCSNCGKVLQHDEFTDEPTFVKGAGGESRLAGSYVKS
FQSDYSESFRRTIDKGKQKIHELAVSLGIEDGGAINLADAFYKIAVERSFTKGRRTDQVA
AACLYIACRENKKPFLLIDFSICLGINVYVLGAVFLQLCQLLSLQEHPIVQKAVDPSLFI
SRYTNALVGENRKVNSTALHIIASMKRDWMQTGRKPSGLCGAAVYISALSHGFKCSKLDI
VKAVHVCEATLTKRLIEFENTDSGSLTIEELIRNADELKKEDRLSKLSDANSRNSETMEV
LCQHKDRKPHFAGLCESCCQEFIELSGGIHGGADPPAFQIAERERLAEVSSEKVTDSSFI
LKPHRHEGSDEHISEVELEHSTKANQNATEAETANFTESACASSVEDQATIGDDADIFQK
SNDTNSIADEPDRLSDIDDDEVEGYLNNEEECYYKKIIWEEMNKEYLQEQAAKEAAAAAA
FKDLSGASDEMRSAQELAAAANAAVAKSREERRKKRASENGNPAQTAAEATRQMLTKKGL
SSKINYDVLDKLFDDQPVHDTKRTRIESPRASDIDVQQQFSKERNGAYTDYDGDEKEEEN
GEVEDMGGEEPDEWYSRNEEEVEDYSYYDNDGDDEY
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atgggttggtgccctcactgcaaggagaatcaccccacacaccgtgattatgataccggc
accatgatatcttgttctaattgtggaaaagtgcttcaacacgacgagttcactgacgag
cctacttttgtcaagggcgctggaggagagagccgattagcaggtagttatgtcaagagt
tttcaatctgattactcagagtcatttagaaggaccatagacaaagggaagcaaaaaatc
catgaattagcagtatcactaggtatagaggatggtggtgctatcaacctagctgatgca
ttctataagatagctgttgagcgtagttttaccaaggggcggagaaccgaccaagttgca
gcagcttgcctttatattgcttgccgggaaaacaaaaagccttttctacttattgatttc
tccatttgtttgggtataaatgtgtatgtacttggtgctgtctttctacagctttgccaa
ttgttaagtctccaagagcatcctattgttcaaaaggcagtcgatcccagcctttttatt
agtcgatatacgaatgcattagtgggagaaaataggaaggttaatagcactgctttacac
ataatagccagcatgaagcgagactggatgcagacaggcagaaaacccagcgggctatgc
ggcgcagcagtgtatatctcagctctctcacatgggttcaaatgttcaaagttggacatt
gtgaaagctgttcatgtatgtgaagcaacattgacaaaacggctgatagagtttgagaat
acagattctgggagcttaacaattgaagagctcattaggaatgctgatgagctaaaaaag
gaggatcgtttaagcaaactgtcagatgctaattcccgaaattctgagacaatggaagtg
ctatgtcaacacaaagaccgaaagcctcattttgctggactgtgtgaaagttgttgtcaa
gaattcatcgaactctctggtggcatccatggaggagcagaccctcctgctttccagatt
gcagaaagggagagattagccgaagtatcttctgagaaggttacagattcaagttttatc
ttgaagcctcatcgacacgaaggcagtgacgagcatatcagtgaagtggaattggaacat
tccactaaagccaaccaaaatgcgactgaagctgagacagctaacttcacagagtctgct
tgtgcttcttctgtagaagatcaggccacaattggtgatgatgctgatatatttcagaag
tctaacgatacaaatagtattgctgatgaaccagacagactttcggatattgatgatgat
gaggtggaaggctacctaaacaatgaggaggagtgttactataagaagattatttgggaa
gaaatgaacaaagaatatcttcaggaacaagcagcaaaggaagcagcagcagcagctgct
tttaaggaccttagtggggcttctgatgaaatgcgcagtgctcaagaacttgctgctgcc
gctaatgctgcggtagcaaaatcaagggaggaacgacggaaaaaacgagcttcagaaaat
ggcaatcctgctcaaacagctgcagaagcaacccgccaaatgctaacaaagaagggattg
agttcgaagatcaactatgatgtactcgataaactcttcgatgatcagcccgttcatgat
accaaaagaactcgcattgaatcgccgcgtgctagtgacattgacgtccaacaacagttc
agcaaggaacgaaatggagcatatactgattatgatggcgatgagaaggaagaagagaat
ggagaagtggaagacatgggcggtgaagaaccggacgaatggtattctagaaatgaggag
gaagtagaggattatagctattatgacaatgatggagatgatgaatattga
DBGET
integrated database retrieval system
