Rhododendron vialii: 131325908
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Entry
131325908 CDS
T09330
Name
(RefSeq) asparagine--tRNA ligase, cytoplasmic 1
KO
K01893
asparaginyl-tRNA synthetase [EC:
6.1.1.22
]
Organism
rvl
Rhododendron vialii
Pathway
rvl00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
131325908
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
rvl01007
]
131325908
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rvl03016
]
131325908
Enzymes [BR:
rvl01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.22 asparagine---tRNA ligase
131325908
Amino acid related enzymes [BR:
rvl01007
]
Aminoacyl-tRNA synthetase
Class II (A)
131325908
Transfer RNA biogenesis [BR:
rvl03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
131325908
Prokaryotic type
131325908
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
WHEP-TRS
PepSY
Seryl_tRNA_N
tRNA-synt_2d
APG6_N
Desulfoferrodox
Motif
Other DBs
NCBI-GeneID:
131325908
NCBI-ProteinID:
XP_058214380
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Position
5a:complement(4032678..4037158)
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AA seq
569 aa
AA seq
DB search
MSSAFAPPVDEISSLSLTPATTTVEESEFSQRVLIRSIITRPDGGAGLAGQTVRVGGWVK
TGRKQGNGTFAFLELNDGSCPANLQVIVDEAVGQLSQLVATGTGVHLEGELKVPPVEAKQ
RVELRVQKILDLGTVDPAKYPLPKTKLTLELLRDYVHLRPRTNTISAIARIRNALAYATH
TFFQKHGFLYVHTPIITTSDCEGAGEMFQVTTLINDAEKLEKELIKNPPPSEADVEAAKL
LVTEKGEAVSQLKSAKANKETITAAIAELTKAKESLSKLEERFKLKPGIPYKDGKIDYSQ
DFFARQAFLTVSGQLQVETFACALSSVYTFGPTFRAEHSHTSRHLAEFWMVEPEIAFADI
QDDMNCAEGYVRFLCQWLLDNCLDDMEFMVKNYDKSAIDRLRMVSSTKFVRISYTEAVAI
LEEASKERQFENKVEWGIDLASEHERYLTEVKFKSPVIVYNYPKGIKAFYMKVNPDNKTV
AAMDVLVPKVGELVGGSQREERYEVIKDRILEMGLPLEPYEWYLDLRRFGTVKHSGFGLG
FERMILFATGLENIRDVIPFPRYPGRADL
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgtcatccgccttcgcgccgcctgtggatgaaatctcttccctatccctaacccccgcc
accacgaccgtcgaggaatccgaattctctcagcgcgtcctgatccggtccatcatcacc
cggcccgacggcggcgccggtctggccggccagacggtccgcgtcggcggctgggtcaag
accggccgcaagcagggcaatggcaccttcgccttcctcgagctcaacgacggctcgtgc
cccgccaatctccaggtaattgtcgatgaggccgtgggacagctgagccagctggtggcg
actggcacgggcgtgcacctggagggagagttgaaggtgccgccagtagaggcgaagcag
agggtcgagcttagggttcagaagattcttgatttggggactgtggatccggctaagtac
ccgttgcctaagactaagcttacccttgagcttctgagggattatgttcatcttcgacct
agaaccaatacgatttctgcaatcgctcgcatccgcaatgctttggcttatgcaacccat
acattcttccagaagcacgggtttctttacgttcacactcctataatcaccaccagtgat
tgtgaaggtgcaggagaaatgttccaagtcacaaccttgattaacgatgctgaaaagttg
gagaaggagttgattaagaatcctcctccatctgaagctgatgtggaagcggctaagcta
cttgtcacggagaaaggagaggctgtttctcaactaaaatccgccaaagccaataaggaa
acaataactgccgccatcgcagaactaacaaaagctaaagagagtctctcaaagctggaa
gagagatttaagctgaaacctggtataccttacaaggatgggaagatagattactcccaa
gatttctttgcccgacaagcatttttgactgtttctggacagcttcaagttgaaactttt
gcctgtgccctcagtagtgtctatacatttggtccaacttttcgagcagaacactcacac
acctcaaggcatctggcagagttctggatggtggagcctgaaatagcatttgcagatatt
caggatgacatgaactgtgcagaggggtatgttagattcttgtgtcaatggttacttgac
aattgccttgatgatatggaatttatggttaagaactacgacaaaagtgcaattgatcgt
ctaagaatggtttcttctaccaaatttgtccgtatttcttacacggaagcagttgcaatt
cttgaggaagcatcgaaagagaggcagtttgagaataaagtagaatgggggattgattta
gcatctgaacatgaaagatacttgactgaagtgaaatttaaatcccctgttatcgtttat
aattatccgaaagggattaaagcattctatatgaaggtcaaccctgacaacaaaacagtt
gctgctatggatgtgcttgtaccgaaggttggagaactagttggaggaagccaaagagaa
gagcgttacgaggtcatcaaggataggatattggagatggggcttcctcttgagccgtat
gagtggtaccttgaccttcgtcgctttggcactgtcaaacatagcggttttggtttaggc
tttgaaaggatgattctctttgccactgggcttgaaaacatcagagatgtaattcccttc
ccaagataccctggaagagcagatctgtga
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integrated database retrieval system
