Rhododendron vialii: 131325961
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Entry
131325961 CDS
T09330
Name
(RefSeq) autophagy-related protein 18a-like
KO
K22991
WD repeat-containing protein 45
Organism
rvl
Rhododendron vialii
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rvl04131
]
131325961
Membrane trafficking [BR:
rvl04131
]
Autophagy
Other autophagy associated proteins
Others
131325961
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROPPIN
Beta-prop_THOC3
BCAS3_WD40
Beta-prop_IFT122_1st
WD40
Beta-prop_WDR5
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_WDR3_1st
Beta-prop_WDR36-Utp21_1st
WD40_Prp19
Beta-prop_WDR90_POC16_2nd
Beta-prop_RSE1_2nd
Beta-prop_WDR36-Utp21_2nd
ANAPC4_WD40
Beta-prop_WDR3_2nd
WDR55
CFAP251_N
Beta-prop_WDR19_1st
Beta-prop_HPS5
Beta-prop_EML
Beta-prop_TEP1_2nd
WD40_Gbeta
Beta-prop_EMC1_N
Beta-prop_IFT80_2nd
Motif
Other DBs
NCBI-GeneID:
131325961
NCBI-ProteinID:
XP_058214467
LinkDB
All DBs
Position
5a:complement(28451819..28460920)
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AA seq
461 aa
AA seq
DB search
MTTALSSSTSSWPPLPSPNPNNFSTSLIPSHMSNPHPPSSSSHPSFSDFTETDHPSVSDF
TDTDSEPPHQSPSVISDDASAISFFSDAPASTTNPNPNDDLARSLSPPPALLHLSFNQDS
GCFAAGTDRGFRIYNCDPFREIFRREFDNNGGGISVVQMLFRCNILALVGGGPEPQYPLN
KVMIWDDHQGRCIGELSFRSEVMSVRLRRDRIVVVLAQKIFVYNFSDLKLLHQIETIANP
KGLCELSHQSSSMVLVCPGLQKGQVRVEHYASKRTKFIMAHDSRIVCCALTHDGRFLATT
SSKGTLVRVFNTLDGSLLQEVRRGADRAEIYSLAFSSTAQWLAVSSDKGTVHVFSLKVDS
GSLGIERSRSAPESSLSNPPALSSLSFIKGVLPKYFSSEWSVAQFRLQEGSQYIVAFGHE
KDTVVILGMDGSFYRCQFNPVSGGEMTQLEHHNFLKPEETF
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgacaaccgccctctcctcttccacctcctcctggccccctctcccctccccaaaccct
aacaatttctccacctccctaatcccctcccacatgtccaacccccaccccccctcctcc
tcctcccacccgtccttctccgattttaccgagaccgaccacccatccgtctccgatttc
accgacaccgactccgagccaccgcaccaatcgccctccgtcatctctgacgacgcctcc
gctatctccttcttctccgacgctcccgcctccaccaccaaccccaaccctaacgacgac
ctcgcccgatccctctccccgccccccgccctcctccacctctccttcaaccaggactcc
ggctgctttgctgccggcaccgaccgcggcttccgcatttacaactgcgaccccttccga
gagattttccggcgggagtttgacaacaacggcggcggcatcagcgttgttcagatgctc
ttccggtgtaacattctggcgttggttggcggcgggcccgagccgcagtaccccttgaat
aaggtgatgatttgggacgatcatcaggggaggtgcatcggagagctttcctttcggtcc
gaggttatgtctgttcggcttaggcgggacaggattgtggtggttttggcgcagaagatt
tttgtttacaatttttcagacttgaagttgcttcatcagattgagacaatcgcaaatccc
aaggggctttgcgagctttcgcatcagtcatcttcgatggtgctggtttgcccggggttg
cagaaggggcaggttagggttgagcattacgcttccaagcgaaccaagtttattatggct
catgattcaaggattgtttgctgtgctctaactcatgatggccggtttcttgctacaacg
agtagtaaggggacgttagttcgtgttttcaatactttggatgggtcattgcttcaggag
gtaagaagaggtgcagacagagctgagatctacagtcttgcgttctcttcaactgcacaa
tggctggctgtttcaagtgacaagggaactgtccatgtcttcagcctcaaggttgattca
ggatctttagggattgaaagatcacggagcgcgcctgaatcaagtctgtcaaatccgcct
gctctttcatctctttcctttattaaaggtgtgctgccaaaatatttcagctcagagtgg
tcagtggctcaattccgcttgcaggaaggttctcaatacattgtcgcctttggccacgaa
aaggacaccgtagtgatactcggcatggatgggagcttctatcgttgtcaattcaaccca
gtgtctggaggggagatgactcagctagaacatcataatttcttgaagcctgaagaaaca
ttctaa
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