Rhododendron vialii: 131326025
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Entry
131326025 CDS
T09330
Name
(RefSeq) uncharacterized protein LOC131326025 isoform X1
KO
K08518
syntaxin-binding protein 5
Organism
rvl
Rhododendron vialii
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rvl04131
]
131326025
Membrane trafficking [BR:
rvl04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
131326025
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
131326025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
WD40_WDHD1_1st
ANAPC4_WD40
WD40_CDC20-Fz
Beta-prop_RIG_2nd
WDR55
WD40_Prp19
Synaptobrevin
Beta-prop_IFT140_1st
Beta-prop_TEP1_C
Motif
Other DBs
NCBI-GeneID:
131326025
NCBI-ProteinID:
XP_058214551
LinkDB
All DBs
Position
5a:complement(41061737..41075378)
Genome browser
AA seq
1117 aa
AA seq
DB search
MFAKRLFQKAINHSPNNVHGPEMLADLDMQIAIHYGIPSTASVLAFDPIQSLLAIGTLDG
RIKVIGGDNIEGLLTSTKQLPFKYLEFLQNQGLLVSVSNDNDIQVWDLESRCITGSLQWE
SNITAFSVIYASHFMYIGDEYGRMSVLKYQTEDAGLLKLPYYVSLDHITEAADISIPDDQ
PIVGILPQPCSSGQRVLIAYACGFLVLWDVVEARIVVARGDKVLQLKDGVVDSPNLPGDA
SEQHLEEKEISALCWASSSGSILAVGYIDGDILFWKTSSAAPSKGKQPEISANVVRLQLS
SAESRLPVIVLHWSANSNSHSDCDGQLFIYGGCEIGSEEVVTVLSIEWSSGMEALRCVGR
VDLTLNGSFADMIILPPAGTRKNNNFSLLVLTNPGQLHFFDDAKFSTSVCQLEKRMSVAA
VEFPMVVPTSNQYLTAAKLSFLPSDGNSCNALSKIASLMKCDPNSTPGGGARRLLTGGIA
NRSSFTEGNRIQKLYVAGYRDGSVRLWDATYPVLSLIYILETEVKGIKVAGSSASVSNID
FCPVTLSLAVGNEYGLVHMYNLNGGLDETSFHFITETKREVHNLPQGERYCCQAVFCLVN
SPVQALKFTSCGSKLAVGYNGDRVAVLDTRSFSVLFLTDCLSATSSPIISVAWTSFIRSP
KNSGPKSLDKSQEELIFMLTKDAKVYVIDGVAGTVISSRPVHLKKQSTAISMYVIGKYET
MSSQSCEVSFVNPLYSEGNAPVSGSSNKKQPLQVPNNSTGIDEPSLETTSSENYSSENAK
FSGSSKDSVVLLCCKDTLSLYHTKSVVQGEKKSISKLKLAQPCCWAATFKKDEKVCGLAL
LYQTGDVEIRSLPYLGLVKESSLMSILRWNYKANMEKTMSSTDNGLISLANGCEFAVLSL
LGCENNFRISEYLPSLHDKVLAAAAEAAIGLSLNQKKKQGTSRRILGGIVKGFKGGKVGD
RNDVTFPSKSYYRDLDGVFWRNPFPDPSSAVTQNQEVVEVSIDDIEIDEPVPVASTSTNK
PEKNQKEKGGERGRLLNGGSADIKPRLRTPEEIMATYRKAGDAASVAAQARNKLLERQEK
LERISKRTEELRSGAEDFASLANELVKVMESRKWWHI
NT seq
3354 nt
NT seq
+upstream
nt +downstream
nt
atgtttgcgaagcgattgtttcagaaggcgatcaatcactctccgaataatgtgcatgga
cctgagatgttagcggacttggatatgcaaatagctatacattatggcataccgtctacg
gcatcagttcttgcatttgaccccatccagagcctactggccattgggacactggatggt
aggataaaagttattggtggggataatattgaaggacttctgacttctacaaagcagttg
ccttttaaatacttggagtttctacaaaaccaagggcttttagtgagtgtttctaatgac
aatgatattcaggtttgggatctagagagcaggtgtattactggcagtctacaatgggaa
tccaatataactgctttctctgtaatctatgcctcccatttcatgtatattggagatgaa
tatgggaggatgtctgtactgaagtaccaaaccgaggatgcagggcttttaaaattgcca
tattatgtttctctggatcatataacagaagcagctgacatttcaattcctgacgaccaa
ccaattgttggaattcttccccagccgtgttcttctgggcagagagtcctgatcgcatat
gcttgtggttttcttgttctgtgggatgttgttgaagcccggattgtagttgctagaggt
gataaggttcttcaattgaaagatggagtagttgattctcctaaccttccaggtgatgca
tctgaacaacatttggaggagaaagagataagtgcactttgttgggcatcttccagtggc
tccattctagctgtgggttatatagatggagatatactgttctggaagacatccagtgct
gcccctagtaaaggcaaacaacctgaaatatcagccaacgttgttaggctacaactatct
tctgctgagagtaggctgcctgtcattgtcttacactggtctgcaaacagtaattctcat
agtgattgcgatggccaactcttcatctatggtggttgtgagataggatctgaagaagtt
gtaactgttttgagtattgaatggtcatctgggatggaggctttaagatgtgttggtcga
gtggacctcacacttaatggttcctttgctgacatgattatcttaccacctgctgggaca
aggaagaataacaacttttccctattggtgttgacaaatcctggacaactgcattttttt
gatgatgctaaattttctacttcagtatgtcagctagagaaaagaatgtctgtcgctgct
gttgaatttcctatggttgtaccaacttctaatcaatacctgacagctgcaaaactcagt
tttttaccctcagatggaaactcatgcaatgctctgtcaaagatagcgtcactgatgaaa
tgtgatccaaattcgacgccgggtgggggcgcaaggcggctgttgactggaggcatagct
aaccgatcgtcctttactgagggtaacaggattcagaaactgtatgtggcaggttaccga
gatggatctgttcggctatgggatgctacttatccagtcttaagccttatttatatttta
gaaaccgaggtcaaaggtataaaagtagctggttcaagtgcttcagtgtcaaacattgat
ttctgccctgtcactctaagtttagctgttggcaatgaatatggtctggttcatatgtat
aacctcaatggcggtttggatgaaacaagctttcacttcattacggaaacaaaacgtgaa
gttcacaatttgccccaaggcgaaagatattgttgtcaagctgttttttgccttgtcaat
tctccagttcaagcattaaaatttacaagttgtggatccaaacttgctgtaggttataat
ggtgatcgtgttgcagtgcttgatacgaggtcattttcggttttgtttttaacagactgt
ttgtctgccactagctcgcccataatttcagtggcttggacgtcgtttattagaagccct
aagaactcaggacccaaatctctagacaagtcccaagaggaattaatattcatgctaaca
aaggatgcaaaagtttatgtcattgatggtgttgctggtaccgtgatcagctctcgtcca
gtccacttaaaaaagcagtccacagcaatttccatgtacgttattggcaagtatgagaca
atgtctagccaaagttgtgaggtaagttttgtgaatccactgtactcagagggcaatgca
ccagtctctggttcatcgaataaaaagcagccactgcaggtgcccaacaattccaccggc
attgatgagccttctctagaaactacttccagtgaaaattactcatcagaaaatgcaaag
ttcagcggaagttcaaaggattcagttgttttgctttgttgtaaggataccttgagcttg
taccacacaaagtctgtagttcagggggagaaaaaatctatcagcaaattgaaacttgca
caaccttgttgttgggcggcaactttcaagaaagatgagaaagtttgtggcttggcatta
ctctatcagactggagatgtggaaatcagatctttgccatacttaggattggtcaaagaa
agctccttaatgtcaattttgaggtggaattacaaggcaaacatggagaagaccatgagt
tctacagacaatgggctgatttcactggcaaatggttgtgaatttgctgtcctctctctt
ttgggatgtgaaaataatttcagaatatccgaatatcttccttctcttcatgacaaagtc
cttgcagctgcggcagaagctgccattggtttgtctttgaatcagaagaaaaaacagggt
acttcccgtcggattctaggtggtattgtgaagggtttcaaaggggggaaagtgggcgat
agaaatgatgtgactttcccttccaaatcttattatagagatctagatggggtcttttgg
aggaacccattcccagatccatcttcggctgttacacaaaatcaggaagttgtggaagtc
agcatagatgatatcgaaattgacgaacctgtaccggtggcatctacttcaacaaataaa
ccagagaaaaatcagaaagaaaagggtggtgaaagaggaagattacttaatggagggagt
gctgatataaagcccagacttaggactccggaggaaatcatggcaacatatagaaaagct
ggggatgccgcttcggtggctgcgcaagcaagaaacaagcttctagagcgccaagagaaa
cttgagaggattagcaagcgaactgaggaattgagaagtggagctgaagactttgcatca
ttagcgaacgagctagtaaaggtgatggaaagtcggaaatggtggcacatatga
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