KEGG   Rhododendron vialii: 131326072
Entry
131326072         CDS       T09330                                 
Name
(RefSeq) cyclin-H1-1 isoform X1
  KO
K06634  cyclin H
Organism
rvl  Rhododendron vialii
Pathway
rvl03022  Basal transcription factors
rvl03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:rvl00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    131326072
  09124 Replication and repair
   03420 Nucleotide excision repair
    131326072
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:rvl03021]
    131326072
   03400 DNA repair and recombination proteins [BR:rvl03400]
    131326072
Transcription machinery [BR:rvl03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     131326072
DNA repair and recombination proteins [BR:rvl03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     131326072
SSDB
Motif
Pfam: Cyclin_C_2 Cyclin_N TFIIB RB_B
Other DBs
NCBI-GeneID: 131326072
NCBI-ProteinID: XP_058214642
LinkDB
Position
5a:complement(41728306..41737243)
AA seq 327 aa
MMADFLTSTHRAKWIFSPQDLKEKYKAANQRARQALEKYGATRMEVDIDGSWSYPEPQPD
AKEIVEKHSRPKPLKTEEEQLLRTFYEFKIQDVCDAFKFPRKIQATALIYFKRFYLQWSV
MEHHPKDIMLTCIYAACKAEENHVSAEELGKAIEQDHQMILNNEMIVLQSLGFDLIVYAP
YRALDGFVNVMEEFIEANDDQLQTLKDVHEIAKVESDKIMLTDAPLLFPPGQLALAALYR
ANEVHGLLDFERYVGSLLSRQHDTHSISELTVSMNAIISLVSKLVTLTAADMKHVDRKLK
LCRDPSSHDKSKKRKHRSKESSSEMHA
NT seq 984 nt   +upstreamnt  +downstreamnt
atgatggctgattttctaacttcaactcaccgtgccaagtggatcttctctccccaagat
ctgaaagaaaagtacaaagctgctaatcaaagggcaaggcaagcactggaaaagtatggg
gcaacaagaatggaagtagatattgacgggtcttggtcgtaccctgaacctcaacctgat
gctaaagagattgttgagaagcattcacgtcctaaaccactaaagactgaagaagaacaa
cttctgcggacattctatgagttcaaaattcaagatgtatgcgatgccttcaaatttccg
cgtaaaatacaggcaacagctcttatatacttcaaacgattttatctacaatggtcggtt
atggagcatcaccctaaagacattatgttaacatgcatatatgcagcttgtaaggctgaa
gaaaatcatgtatcagcagaagagcttggtaaggcaattgaacaggatcatcaaatgatc
ctcaataatgagatgattgttcttcagagtctaggttttgacctcatcgtttatgcacca
tatcgtgcacttgatggttttgtcaacgttatggaggaatttatcgaagcaaatgatgac
caacttcaaacgctaaaggatgtgcatgaaattgctaaggtggaatcagataaaatcatg
cttacagatgctccccttctcttccctcctgggcagttggcattggctgctttgtaccgg
gcgaatgaggtgcatgggcttctcgactttgagagatacgttgggagccttctctctcgc
cagcatgatacacactccatttcagaactcactgtttctatgaatgccataatctccttg
gtaagtaaacttgtgacccttactgctgctgatatgaagcacgttgatcggaagctcaaa
ttatgccgggatccgagctcacatgacaagagtaagaaacgaaagcaccggtccaaggag
agttcaagtgaaatgcatgcataa

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