Rhododendron vialii: 131326098
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Entry
131326098 CDS
T09330
Name
(RefSeq) protein BREAST CANCER SUSCEPTIBILITY 2 homolog A-like
KO
K08775
breast cancer 2 susceptibility protein
Organism
rvl
Rhododendron vialii
Pathway
rvl03440
Homologous recombination
rvl03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
131326098
03460 Fanconi anemia pathway
131326098
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rvl04121
]
131326098
03036 Chromosome and associated proteins [BR:
rvl03036
]
131326098
03400 DNA repair and recombination proteins [BR:
rvl03400
]
131326098
Ubiquitin system [BR:
rvl04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
131326098
Chromosome and associated proteins [BR:
rvl03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
131326098
DNA repair and recombination proteins [BR:
rvl03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
131326098
FA (Fanconi anemia) pathway
Downstream FA components
131326098
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCA-2_OB1
BRCA2
BRCA-2_helical
Motif
Other DBs
NCBI-GeneID:
131326098
NCBI-ProteinID:
XP_058214678
LinkDB
All DBs
Position
5a:complement(41961998..41970955)
Genome browser
AA seq
1117 aa
AA seq
DB search
MSTWQIFSDADSNFRWEISDQQLHIKLQQQEDAAPISPPNSTPLLPSMADLLLQGCSELI
ENGEGNLESPPMFRSGLGKSVSVKQSSITKALSILGDKGDAFADTGQFCDGNDFGCSFSN
SMFQTGSGKKVNISSTGLVRAKTLLGLEESYDHDTPPGLEHSNNQSASEEPFGWRTSSQQ
QTRQGVTTPCHKNATAAPMTILNFKTSSLGSDSKREAIPDLIRSDPKCPPIKFHTAGGRS
ISVSGDALQRAKSLLGDLELGTLFDEGNVNSPSFSFFKEGSLDENNSNKENYPLSNHNQE
IAKSRHVSKGFVSPLRPGSNLMQSSLVSQNVTLGINLIKKFDAEEFGSTCKMSDNTNCHQ
KPPSGRPSSHAEGGNSLVNGVTSRTNPRGSSLGRPLADISNNIGMADIDSKLTTGEKRRI
ARSSISPFKRPRNSRFITPLNNLVSASSGMSTLAPEESNCRRRVSTRYPFQVPRMYIKEY
FGVPPFQLNTLKQSPCHIRRMNPENAEKYMFRDRSGVECIGSEAFYHMLAQFGASVQYVS
KEWVVNHYKWIIWKLACYERCYPAKSLGKLCTIFNVLEELKYRYEREVNHGHRSAIKRIL
EGDQPPSSMLVLCISSIHSNCDLPAETLPLASNGAEDGTTTKLELTDGWYSINALLDAYL
LKKLATGKLFVGQKLRIWGAELCGWVGPVSPLQASSTVNLLLHINGTYRAHWADRLGLCK
GGGVPLAFRCIKGMGGPVPSTLVGVTRIYPVLYRERLSDGGFIVRSERLEAKMIHLHNQR
RSVIAEGIISEFQRGIEEGHTNNDNDSEEGAKILKLLETSAEPEMLMAEMTSEQLTSFST
YQAKQEAIRQTDIQKSIEKTLEEAGLSERDVTPFMRVRVSGLTCENRVSPRIGLITIWNP
TEKQKLELVEGKAYAVAGLIPSRSESDTLYLHARGCTTKWVPLSVSATEDFELFFSPRKS
VVLSNLGDVPLSSEFDIAALVVSVGEVCSDTHQKKQWVFVTDGSVSESELEQTSSSLLAI
SFSLPYNDCNSFAPINHNLVGSVVGFYNLIKRANDQINHLWVADTTENSTYSLSYDHVHY
SHLKKAAASAERWAKISGSTIEKLRQKVLSIIGNDEG
NT seq
3354 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacgtggcagatcttctccgacgccgacagcaacttccggtgggagatctctgat
caacagctccacatcaaactgcaacaacaagaagatgccgctccgatctcacctcctaac
tccactcctcttctcccttccatggccgatctcttgcttcaaggatgttctgagctaata
gagaatggcgaaggaaatctcgagagccctccgatgttccgaagtggattgggaaaatcg
gtttcggtgaagcaatcttccataacgaaagcattatctattctcggcgacaaaggggat
gcctttgccgatacaggccaattctgtgacgggaatgatttcggatgcagcttctctaat
tcaatgttccagacaggttcagggaaaaaggttaacatatcttccactggtcttgttaga
gcaaagacactattggggttggaagaaagttacgatcacgatactcctccaggccttgaa
cattcaaataatcagtcagcctctgaggaaccctttggatggcgaacatcatctcaacaa
cagacaagacagggagttaccaccccatgtcataagaatgctactgcagctccaatgact
atactaaattttaagactagttcattaggaagtgattcgaaaagagaagctattccagat
cttatacgttctgatcccaagtgccctccaataaagtttcatactgctggtggaagatcc
atctcagtttcaggtgatgcattgcagcgtgcaaagagccttctcggtgacctggaacta
ggaacattgtttgacgaagggaatgtgaatagtccatctttctcattttttaaagaagga
agtttggacgagaacaattctaacaaagagaactacccgttatctaatcacaatcaagaa
atagcaaagagcagacatgtatcgaagggttttgtgtcccctctgcgaccagggtctaac
ctaatgcaatcatcactcgtgtcccagaatgtaactttagggattaacttgatcaagaaa
tttgatgcagaggagtttggcagtacttgtaagatgtctgataatacaaattgtcatcaa
aagcctccaagtggtaggccttcttctcatgcagaagggggcaattctttggtgaatggc
gtcacttcaagaactaatccacgaggaagttcattgggccggccactggctgatatttca
aataacattggaatggctgatattgacagtaaacttactactggtgaaaagaggagaatt
gcaaggagttctatctctccattcaagagaccccgcaattcaagattcattacccccctg
aataacctagtgtctgcttctagcggcatgtccactttagcacctgaagaatccaattgc
agaagacgggtttccactcgatatccttttcaggttccacgaatgtatatcaaggaatac
tttggagtacccccattccaacttaatacattgaagcaatcaccatgccatataagaaga
atgaatcctgaaaatgcagaaaagtacatgttccgcgatcgatctggtgtggagtgcatt
ggatctgaagctttctaccacatgttggctcagttcggagcttcagtgcaatatgtttct
aaagagtgggttgtgaatcactacaagtggatcatttggaagctagcatgctatgagaga
tgttatcccgccaaatcattagggaaattatgtacaatttttaatgtgcttgaagagtta
aaatataggtatgagagagaagtaaatcatggtcaccgatctgctattaagagaattcta
gaaggagatcaaccaccctcttcaatgttggtactatgcatatcatctattcattccaac
tgtgatctgccagcagaaactctgcctttggcatcaaatggtgctgaagatggtacaaca
acaaaactagaattaactgacggatggtactcaatcaatgctctattagatgcatatcta
ttgaagaagctggccactgggaaactgtttgtggggcagaaacttaggatctggggtgct
gaattgtgtggctgggtagggcctgtttcacctctccaggcatcaagcacagttaatctt
ctgctgcacataaatgggacgtatagagctcattgggctgaccgattagggttatgcaag
ggtggtggtgttccattagcatttagatgcatcaagggtatgggaggtccagtgcctagt
acattagttggagtcacacggatataccctgttctctacagggaaaggttaagtgatggg
ggatttattgttagatcagagaggttggaagctaaaatgatacacttacataaccaaagg
cgctctgtcattgcagagggcattatttcagagtttcaaaggggaatcgaagaaggccat
actaataatgacaatgatagtgaagaaggtgcaaaaattctgaagttattagagacttcc
gctgagcctgaaatgttaatggcagagatgacttcagagcaactgacttctttttctact
tatcaagcaaaacaagaggcaattaggcaaacagacatccaaaaatcaattgaaaagact
cttgaagaggctggtctaagcgaaagagatgtcaccccatttatgagggtgagagtctcg
gggctaacttgtgaaaatcgagttagcccaaggataggcttaataaccatctggaaccca
accgagaagcagaaattggaactggttgaggggaaagcttatgctgttgcagggcttatc
ccatcaagatccgagtctgataccctttacttgcatgcaagaggatgtactaccaaatgg
gtgcctttatctgtctcagcaactgaggatttcgagttgttcttcagtccccgcaaatca
gtcgttctgtcaaatttgggtgatgttcctctctctagtgaatttgatattgctgcattg
gttgtaagcgtgggagaggtatgttcagatactcatcaaaagaagcagtgggtgtttgtg
acggatggatcagtatcagagtccgagttagaacagacatcaagttccttgcttgccatc
agcttctctttaccatacaatgattgcaattcatttgcaccaatcaaccacaaccttgtt
ggatcagtggttggcttctataacctcattaaaagagccaatgaccaaatcaatcacctc
tgggtggcagatacaacagaaaattccacctattctttaagttatgatcatgtgcattat
tctcacttgaagaaagctgctgcttcagctgagagatgggcaaagatctctggttcgaca
attgagaagcttagacagaaggtcttatctattattggcaacgatgaaggttaa
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integrated database retrieval system
