Rhododendron vialii: 131326142
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Entry
131326142 CDS
T09330
Name
(RefSeq) U-box domain-containing protein 16
KO
K27970
U-box gene family group I [EC:
2.3.2.27
]
Organism
rvl
Rhododendron vialii
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rvl04121
]
131326142
Enzymes [BR:
rvl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
131326142
Ubiquitin system [BR:
rvl04121
]
Ubiquitin ligases (E3)
U-box type E3
131326142
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
U-box
Arm
ARM_ARMC5
MCAfunc
zf-Nse
zf-RING_UBOX
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
131326142
NCBI-ProteinID:
XP_058214740
LinkDB
All DBs
Position
5a:42478976..42481325
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AA seq
675 aa
AA seq
DB search
MAVSPHAFPPRKRRPSAGSFLSPNFSDHRLLQSLLLISNEISSLQPIRYLLRRNSASIIR
KTKLLSVLFEELIRNQVTVFSPSALLCFEELYIVLQRIKTLIEDCSNGSKVWLLMQTESI
ANLFHELTVDLSTLLDIFPVSDMNLNEDVEELVVLIRKQCLQKKPIVDPHDDNLRREVMK
MLDGVQREIVPDHSKLVEIFDNLQLRDSSSCRDEIESLEDEVQNQTDEKSKSDVVALIGL
VRYGKCVLYGASTPRTTLRRRKSAADVNYPADFRCPISLDLMRDPVVVSTGQTYDRPSIN
LWIESGHNTCPKTGQTLAHTNLIPNRALKNLIAMWCREQKIPFEVTEQNEKVNGVIHNKT
ALEATKMTVSFLVNKLTASQSVETANRVVHELRVLAKADSDSRACIAEAGALPLLVKFLG
PEYPNLQVNAVTTILNLSILEANKMRIMESDGVLNGVIEVLRSGATWEAKGNAAATIFSL
TGVQANRKKLGKKPRVVKGLVDLAKGGPASSKRDALVAILSLAGERETVVKLVEGGVVEM
TSELMDTQPEEAATILEVVVKRGGLMAVAAAFHLIKKLAVVLREGSDRARESAAATLVNL
CRKGGSETVGELARVPGIERVIWEMVGMGTGRGRRKAASLLRILRRWAAGLDGIADVTAG
YSTSSMHTTRIVLPG
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atggcagtatctcctcatgctttcccacctagaaagcgccggccgtcggccggctctttc
ctgtcaccaaatttctccgaccacagactactacaatccctcctcctcatctcaaacgaa
atctcatccctccaacccattcgatatctcctcaggcggaattcggcctcgatcatccgg
aaaacaaagcttctctccgtcttatttgaagagcttattcgcaatcaagtaaccgtcttt
tcgccttccgcgttactgtgcttcgaagagttgtacatagttttgcagagaatcaagacg
ttgatcgaggattgctcgaacgggagcaaggtgtggcttctaatgcaaactgaatcgatt
gccaatttgtttcacgagctgacagttgatttgtcgactctgttggatatttttccggta
agcgatatgaatttgaacgaagatgtggaagaactggttgttttgattagaaaacagtgt
ttgcagaagaagccgattgtggatccacatgacgataacctcaggcgtgaagtaatgaag
atgcttgatggagtacagagggagattgttcctgatcattccaagctcgtcgagatcttc
gataatttgcaactgcgcgattcaagcagttgcagggacgaaatcgagagccttgaggat
gaggttcagaatcagacggacgagaaatcaaaatccgacgttgttgcgctgatcgggctc
gttcggtacgggaaatgcgtgttgtacggggcgtcgacgccgaggacgacgttgaggcgg
cggaagtcggcggcggacgtgaattatccggcggatttccggtgtccgatatctttagac
ctgatgcgagatccagtggttgtgtcgacgggccagacttacgaccgcccgtcaatcaac
ctgtggatcgaatcaggacacaacacgtgtccgaagacagggcagaccctggcccacacg
aacctcattcctaaccgggctttgaagaacttgatagctatgtggtgccgagagcagaaa
ataccctttgaggttaccgaacagaacgagaaagtcaacggcgttattcataacaagacg
gcgttggaggccacgaagatgacggtgtcctttttggttaacaagctaacggcttcgcag
tcagtggagactgccaaccgtgtggtacacgagcttcgggtgttagccaaagcagattcg
gacagccgagcctgtattgccgaagctggggctctacctttgctcgtcaaatttctaggc
ccggagtatcctaacctgcaagttaacgccgttacgacgatcctcaacctttccatcctc
gaagcgaacaaaatgaggataatggagagtgacggagttttgaacggcgttattgaggtc
cttaggtcgggtgccacatgggaggcgaaagggaatgcggctgccaccatattcagcttg
acaggtgtacaagccaacaggaagaagctcgggaaaaagccacgtgtcgtaaagggattg
gttgatctggccaaggggggtcccgcgagttcaaagagggatgccttggtggcaattctt
agtttggcaggggagagggagacggttgtgaagttagttgaaggcggcgtggtggaaatg
acaagtgaattaatggacacgcaacccgaggaagcggccacaatacttgaggtggtggtg
aagagagggggattgatggcagtggcagcggcttttcatttgattaagaaattggctgtg
gtgttgagggaagggtcggatagggctcgggagagcgcggctgcgacgcttgtgaatctt
tgtaggaaaggggggtcggagacggtgggggaattagcgagggttccggggatcgagaga
gtgatatgggaaatggtgggaatgggaacggggagaggaaggaggaaggccgcgtcgcta
ttgaggattttaaggagatgggctgctgggttggatgggatcgcggatgtaacggctggt
tactcgacttcgagtatgcatacaacgaggattgtcctgccagggtaa
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