Rhododendron vialii: 131326319
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Entry
131326319 CDS
T09330
Name
(RefSeq) uncharacterized protein LOC131326319
KO
K22611
squamous cell carcinoma antigen recognized by T-cells 3
Organism
rvl
Rhododendron vialii
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rvl03041
]
131326319
03036 Chromosome and associated proteins [BR:
rvl03036
]
131326319
Spliceosome [BR:
rvl03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
131326319
Chromosome and associated proteins [BR:
rvl03036
]
Eukaryotic type
Histone modification proteins
Other histone modification proteins
131326319
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_N
Suf
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
RRM_1
TPR_14
Lsm_interact
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
Motif
Other DBs
NCBI-GeneID:
131326319
NCBI-ProteinID:
XP_058215043
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Position
5a:complement(19825668..19874612)
Genome browser
AA seq
858 aa
AA seq
DB search
MDETLVPSDPQPTDEVMNEVQQNPNKNPSKSDSESESDDNDSDDEAQQTVQIETLEIELS
NNPANYDAHVQYIRALRKKGDIEKLRKAREAMSELFPLSPAMWQDWAKDEASLGSGSESF
PEIEKLYECGVFDYLSVSLWCDYLNFVQEHEPSVRECSPVGILKARDLFERALTAAGLHV
AEGHRIWEAYREFEQAIFYTIDATDVEAREKQIQRIRHIFHRQMSIPLGELRSTLVAYKS
WEAEHGTVPDANSGELDGVSSYVASAYQKALEMLNARVLFEERVSRLDAPDVERLQEYMA
YLKFEQSSGDPARVQLLYERAITEFPISNALWFDYTRYMDSTLKASSIVRDVYLRATKNC
PWVGELWVRYLLSLERGRASEKEISAVFEKSILCTFSSFDEYLDIFLTRVDGLRRKISQA
GEVEDALDYAVIRDTFQRASDYLSPHLKDMDGLLRIHSYWARLESSLGKDLVAARGVWEC
LLKISGSMLDAWKGYIAMEAEMGNINEARSLYRRCYSKRFPGTGSEDICHSWLRFEREFG
MLEDFDRAIQKLTPRLEELQLFRLQQESKNVGLMTNQRENISKRNTPEKRKQGSNVGDEQ
PKAKRQKNTAPDMRKAKGEDKAREKSSVETKTLENTQVKDGKSSSAHGKETKDLTPEKPK
YKDQCTAFVSNLGFQATYDDLRGFFSDVGGVVAIRILKDKYSGKSRGLAYVDFANDAHLE
AAVAKNKRTLLGKRLSIARSDPKQRKTRESLGRHAPVEHGEMSKHANGQTSTVGESDPKE
DKSDTSKGATGGHDPKSTNPHNDGDNIQLKGKNTFAVPRTVRPLGWTDKNIVKMEVAEEG
EDEKPKSNDEFRKMLLRK
NT seq
2577 nt
NT seq
+upstream
nt +downstream
nt
atggacgaaaccctagttccttcggatcctcaacccaccgacgaagtgatgaacgaagtt
cagcaaaaccctaataaaaacccttccaagtccgattccgagtccgaatcagatgacaac
gattccgacgacgaggcacagcaaaccgtccaaatagaaaccctagaaattgagctctcc
aataacccggccaactacgacgctcacgtccaatacataagagctctgagaaagaagggg
gacattgagaagctaaggaaagcaagggaggcaatgagcgagttgttcccgttgagtcct
gcaatgtggcaggactgggctaaagatgaagcctctctgggctctggatctgaatccttt
cctgaaattgagaagctttatgagtgcggcgtgttcgattatctgtctgtctccttgtgg
tgtgactatctgaattttgtgcaagagcacgaaccatcagtccgtgaatgttcacctgtg
ggtattttgaaggcaagggacttatttgagcgtgctcttactgctgctggtttgcatgtt
gctgaaggtcataggatatgggaagcatacagggaattcgagcaagctatcttttacaca
attgatgcgactgatgttgaggcaagagaaaagcagatccagcgcattcgacatattttc
caccgccagatgtctatcccacttggcgagctcaggtcaacgctagttgcctacaagtct
tgggaggcagaacatgggacagttcctgatgccaactctggcgaattggatggagtttct
tcttatgttgcatcagcataccaaaaggcattggagatgttaaatgctcgtgtccttttt
gaagaacgggtttctagactggatgcccctgacgttgaaagacttcaagaatacatggcc
tacctgaaatttgagcagtcttctggggacccagctcgggttcaacttctttacgaacgt
gctataacagagtttcctatatctaatgctctctggtttgattatactcgctatatggac
agtacgttaaaggcttctagtattgtaagggatgtctatttgagggcaacaaagaattgt
ccatgggtgggagagctgtgggttcggtacttgctctcccttgaacgtggtcgtgcttct
gagaaagagatatctgctgtttttgagaagtctattttgtgcactttttcaagcttcgat
gagtacctggatatattcctgactagggttgacggtttacggcggaaaatttcacaagct
ggtgaagtagaggatgccttggactatgcagtaataagagatacatttcagcgtgcatct
gattacttatcaccacacctcaaggacatggatggtttgttgcgaattcactcttactgg
gccagattagagtccagtttgggaaaagatttagttgcagctcgtggagtctgggagtgc
ttgcttaaaatcagtggttctatgttggatgcttggaaaggttatatagcaatggaagcc
gaaatgggcaacataaatgaagctagatctctttacaggagatgctacagcaaaagattt
cctgggacggggtcagaggacatatgccattcctggttacgcttcgagagggagtttggc
atgctggaagattttgatcgtgctatacaaaagttgactccacgtctggaagagctgcag
ttattcaggttgcagcaggaaagcaaaaacgttggtttgatgacaaatcagagagaaaac
atctccaagagaaatacacctgaaaagagaaagcaaggatcaaatgtaggtgatgaacag
ccaaaagcaaagcgacagaaaaatacagctccagacatgaggaaagctaagggagaggat
aaagctcgggagaagagctcagttgaaacaaaaacacttgaaaatacccaagtcaaggat
ggcaaaagtagcagtgcacatggaaaagaaaccaaagatttgaccccagaaaaaccgaaa
tacaaggaccagtgcactgcctttgtatcaaacctaggcttccaggcaacttacgatgat
ctacgtggcttcttcagtgatgttggtggagtagttgctatccgcattttaaaggacaaa
tacagtggaaaatcaaggggattggcatatgtggattttgccaatgacgcacaccttgaa
gccgctgtggcaaagaacaagcggacactactcgggaagagattgagcattgcgcgctca
gatccaaagcagcggaaaacaagggaatctcttggccgtcatgcccctgtggaacatggt
gaaatgtcaaagcatgcgaatggccaaacaagtacagtcggtgaatctgatcctaaggaa
gataaatctgatacatcaaaaggggccacgggaggacatgatcctaaatcaacaaatcct
cataatgatggtgacaatatccagcttaaaggaaagaacacatttgcagtgccaagaact
gtcaggcctcttggttggaccgacaagaatattgtaaaaatggaggtagctgaggaaggt
gaagacgagaagccaaagtccaacgatgagttcagaaagatgttgctcagaaaatag
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