Rhododendron vialii: 131326362
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Entry
131326362 CDS
T09330
Name
(RefSeq) THO complex subunit 4A-like
KO
K12881
THO complex subunit 4
Organism
rvl
Rhododendron vialii
Pathway
rvl03013
Nucleocytoplasmic transport
rvl03015
mRNA surveillance pathway
rvl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
131326362
09122 Translation
03013 Nucleocytoplasmic transport
131326362
03015 mRNA surveillance pathway
131326362
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rvl03019
]
131326362
03041 Spliceosome [BR:
rvl03041
]
131326362
Messenger RNA biogenesis [BR:
rvl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
131326362
TREX complex
131326362
Spliceosome [BR:
rvl03041
]
Complex C
Other components
EJC/TREX
131326362
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
131326362
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
RRM_3
Motif
Other DBs
NCBI-GeneID:
131326362
NCBI-ProteinID:
XP_058215104
LinkDB
All DBs
Position
5a:37303929..37311979
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AA seq
252 aa
AA seq
DB search
MSNLDMSLDDIIKMNKKSGGGGAKPRGGGARNSGPGPGPARRLPNRSANRTAPYAPKVQA
PETTWRHDLFVDHAAAAYAPQAGGGRVSAIETGTKLFISNLDYGVSGEDVKELFAEVGDV
KRYSIHYDRSGRSKGTAEVVFSRRKDAEAAVKRYNNVQLDGKPMKIEIVGTNISTPGILP
TPTIGLFGDQNGAPRSQGRGGPTGRPRGGGRGLERGRGRGRGRGGGPGGEKVSADDLDAD
LEKYHAEAMQTN
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaacctggacatgtcgctcgacgacataataaagatgaacaagaaatccggcggc
ggcggagctaaacctagaggaggcggagctcgtaactccggcccgggacccggacccgcc
cgtcgactcccgaaccggagcgcgaatcgaaccgctccgtacgcacccaaggttcaagcg
ccggagacgacgtggaggcacgaccttttcgtggatcacgcggcggcggcgtacgcgccg
caggccggtggtggtcgagtgtcggcgatcgagacggggacgaagctgttcatctcgaac
ttggattacggggtttctggtgaagacgttaaggagctctttgcagaggtcggggacgta
aaacgatattcaattcattatgataggagcggaagatcaaagggaacggcagaagtagtt
ttctcacggcgaaaagatgctgaggcggctgtcaagagatacaacaatgttcagttggat
ggaaaacctatgaagattgagattgtagggacaaatatttcaactcctggtattctacct
actccaacaattggcctgtttggggatcaaaatggtgcacccagaagtcaagggcgaggt
ggtcccactggacgacctcggggtggcggccgaggcttggagaggggccgtggacgtggt
agaggccgtggtggcgggcctggtggcgaaaaggtatccgcagacgatcttgatgccgat
ttggagaagtaccacgcagaagctatgcaaacgaactga
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integrated database retrieval system