KEGG   Rhododendron vialii: 131326362
Entry
131326362         CDS       T09330                                 
Name
(RefSeq) THO complex subunit 4A-like
  KO
K12881  THO complex subunit 4
Organism
rvl  Rhododendron vialii
Pathway
rvl03013  Nucleocytoplasmic transport
rvl03015  mRNA surveillance pathway
rvl03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:rvl00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    131326362
  09122 Translation
   03013 Nucleocytoplasmic transport
    131326362
   03015 mRNA surveillance pathway
    131326362
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rvl03019]
    131326362
   03041 Spliceosome [BR:rvl03041]
    131326362
Messenger RNA biogenesis [BR:rvl03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     131326362
    TREX complex
     131326362
Spliceosome [BR:rvl03041]
 Complex C
  Other components
   EJC/TREX
    131326362
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    131326362
SSDB
Motif
Pfam: RRM_1 FoP_duplication RRM_3
Other DBs
NCBI-GeneID: 131326362
NCBI-ProteinID: XP_058215104
LinkDB
Position
5a:37303929..37311979
AA seq 252 aa
MSNLDMSLDDIIKMNKKSGGGGAKPRGGGARNSGPGPGPARRLPNRSANRTAPYAPKVQA
PETTWRHDLFVDHAAAAYAPQAGGGRVSAIETGTKLFISNLDYGVSGEDVKELFAEVGDV
KRYSIHYDRSGRSKGTAEVVFSRRKDAEAAVKRYNNVQLDGKPMKIEIVGTNISTPGILP
TPTIGLFGDQNGAPRSQGRGGPTGRPRGGGRGLERGRGRGRGRGGGPGGEKVSADDLDAD
LEKYHAEAMQTN
NT seq 759 nt   +upstreamnt  +downstreamnt
atgtcgaacctggacatgtcgctcgacgacataataaagatgaacaagaaatccggcggc
ggcggagctaaacctagaggaggcggagctcgtaactccggcccgggacccggacccgcc
cgtcgactcccgaaccggagcgcgaatcgaaccgctccgtacgcacccaaggttcaagcg
ccggagacgacgtggaggcacgaccttttcgtggatcacgcggcggcggcgtacgcgccg
caggccggtggtggtcgagtgtcggcgatcgagacggggacgaagctgttcatctcgaac
ttggattacggggtttctggtgaagacgttaaggagctctttgcagaggtcggggacgta
aaacgatattcaattcattatgataggagcggaagatcaaagggaacggcagaagtagtt
ttctcacggcgaaaagatgctgaggcggctgtcaagagatacaacaatgttcagttggat
ggaaaacctatgaagattgagattgtagggacaaatatttcaactcctggtattctacct
actccaacaattggcctgtttggggatcaaaatggtgcacccagaagtcaagggcgaggt
ggtcccactggacgacctcggggtggcggccgaggcttggagaggggccgtggacgtggt
agaggccgtggtggcgggcctggtggcgaaaaggtatccgcagacgatcttgatgccgat
ttggagaagtaccacgcagaagctatgcaaacgaactga

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