Rhododendron vialii: 131326394
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Entry
131326394 CDS
T09330
Name
(RefSeq) uncharacterized protein LOC131326394
KO
K10842
CDK-activating kinase assembly factor MAT1
Organism
rvl
Rhododendron vialii
Pathway
rvl03022
Basal transcription factors
rvl03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
131326394
09124 Replication and repair
03420 Nucleotide excision repair
131326394
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rvl03021
]
131326394
03400 DNA repair and recombination proteins [BR:
rvl03400
]
131326394
Transcription machinery [BR:
rvl03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
131326394
DNA repair and recombination proteins [BR:
rvl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
131326394
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MAT1
DUF5721
DUF5962
Motif
Other DBs
NCBI-GeneID:
131326394
NCBI-ProteinID:
XP_058215149
LinkDB
All DBs
Position
5a:complement(37548620..37553114)
Genome browser
AA seq
189 aa
AA seq
DB search
MVVVNPFSKEMAIRKRIASIFNKREEDFPSLREYNDYLEEVEDMTFNLIEGIDVPAIEAK
IAQYQKENAEQIINAQARKAEEYAAALAASKGHPDSDPTTSQSFQGGVGAGAQGYYAPAV
AGGAIGQPRPTGMAPQPIPIGSNPDMHAYNYDNEEMTRLRAERGGRAGGWSMELSRKRAL
EEAFSSIWI
NT seq
570 nt
NT seq
+upstream
nt +downstream
nt
atggttgtcgtcaatcccttctccaaggagatggccattcgcaaaagaatcgccagcata
tttaataaaagagaggaggatttcccatcattgagagagtacaatgattatttggaggaa
gtggaagatatgaccttcaatttgattgaaggaatagatgttcctgctattgaggcaaaa
attgcacaataccagaaagaaaatgctgaacaaataattaatgctcaagcccgcaaggct
gaagaatatgctgcagctttagccgcaagcaagggacaccctgatagtgatccgaccacg
agccagagctttcaaggaggtgtcggtgcaggtgcgcagggttattatgcccccgcggtt
gcagggggggcaattgggcagccacggccaacaggcatggccccacagcccattcctatc
ggatcaaacccggacatgcacgcctacaattatgacaatgaagaaatgacgagactcaga
gcagagagaggtggaagggcaggagggtggagcatggaattgagcaggaaacgggcactc
gaagaagccttcagtagcatttggatttga
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