Rhododendron vialii: 131326409
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Entry
131326409 CDS
T09330
Name
(RefSeq) ribonuclease II, chloroplastic/mitochondrial
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
rvl
Rhododendron vialii
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rvl03016
]
131326409
Enzymes [BR:
rvl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
131326409
Transfer RNA biogenesis [BR:
rvl03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
131326409
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Motif
Pfam:
RNB
HTH_RNase_II
CSD_RNase_II
PepSY_2
Motif
Other DBs
NCBI-GeneID:
131326409
NCBI-ProteinID:
XP_058215174
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Position
5a:complement(37750666..37762533)
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AA seq
807 aa
AA seq
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MHEGCLAHMTMAVRAMNTCSIFRSASSPPFASLGCRLHRFPALHCRRHPQLGFRISVFQS
SQNHNPFGRAVIRSYHVQSLVDTVTEQLEALRKRHRIRATCKMGVASSGELLEDKLEKQA
LREGLLLEFKKDSERLLLAVARRRDGKKNWMVSDQYGGTTSIKPQQVTFIVPGAENFDHT
DISDFLQKAQNNLDPSLLECAWIELHEKNKTVTVEELAEIIFGSAEPLESYCAHLLLSKD
EVYFTVLEGKSSFCVYGPRPAMQVEELLHKKLAKEAAEKELQDFLQLLKSTKTRPSHEKP
PKSSWENEEKIQHKIKSLEAYAIDACETDDQKKTAGMILKAMGLAKTSASALKLLIDIGY
FPVHVNLDLLKLNIRTDHSDEIISAAERVLSEASDPDELDRIDLTHLKVYAIDVDEADEL
DDALSVTRLMDGRIKVWIHVADPASLVQPGSIVDREAMKRGTSVFLPTATYSMFPEKLAM
EGMSMKQGELCKAVTVSVVLHTDGSIAEYEVDNTTIKPTYMLTYESASELLYMNLEEEVE
LKILSQAAALRFRWRRTQGAIDTSTFESRIKVLNPDDPDPSITLYVEDQADPAMRLVSEM
MILCGEAIATYGSFHNIPLPFRGQPQSNIDVSAFSHLPEGPVRSAAIVKIMRAAEMDFRN
PIRHGILGIPGYVQFTSPIRRYMDLLAHYQVKAFLRGDSPPYSAGQLEGMACLVNMNVRL
VKKLYNSSLRYWILEYLRQQPNEATFRGLILRFIKDRMAAILLVEVGMQASAEVSVGLHV
GDVVKFQVEEAHPRDDFLSLKEVDEWA
NT seq
2424 nt
NT seq
+upstream
nt +downstream
nt
atgcatgaaggctgcctcgcgcacatgaccatggcagtccgagcgatgaacacctgttca
atcttccgctccgcttcttccccacccttcgcttctctcggatgccgcctccaccgattc
ccagccttgcattgtcgtaggcacccgcaattagggtttagaatctcagttttccagtcc
agtcaaaaccacaaccccttcggccgtgctgttatccgaagctaccacgttcaaagtctc
gtcgacaccgtcacggaacagctcgaagccttacgcaaacggcatcggattcgtgccact
tgcaaaatgggagtagcaagctctggggagcttcttgaagataaacttgaaaagcaagca
ctaagagaagggcttctgcttgagttcaagaaagattctgaaaggttattgctagcagtt
gctcggagacgcgatggcaagaagaattggatggtctccgatcagtatggtggcacaaca
tccatcaaaccccaacaagtaacttttattgttcctggtgctgagaatttcgatcataca
gatatatcagattttctccagaaagctcaaaataacttggatccctcactgctcgagtgt
gcctggattgagcttcatgaaaagaataaaacagtgactgtggaggagttagctgagata
atttttggtagtgcggaacctcttgagagctattgtgcccatcttttgctttcaaaagat
gaagtttacttcacagtattggaggggaaaagttccttttgtgtttatgggcctcggcct
gctatgcaggtagaagaacttctgcataaaaagcttgctaaggaggcagctgagaaggaa
ttgcaggatttcttgcagttattgaaatctaccaagacacggccttcgcatgaaaaacct
cccaaatcttcatgggagaatgaggagaaaattcaacacaaaattaaatctcttgaagct
tatgctattgatgcttgcgaaactgatgaccaaaagaaaaccgcgggaatgattttgaag
gcaatggggctagcgaagacatcagcttcagcattaaagctcctcatagatattgggtat
tttccggttcacgtcaatctggatctgttaaagttgaacattcgtactgatcattcagac
gagattatatcagctgctgaaagagttctatcagaagcatcagacccagatgaacttgac
agaattgatctaactcacctgaaggtctatgcaattgatgttgatgaggctgacgagctt
gatgatgctctaagtgtaacaaggttgatggatggccggatcaaagtgtggatacatgtt
gcagatccagctagcttagttcaacctgggagcatagtagacagagaggccatgaaacga
ggaacttctgttttcttgccaactgctacttattctatgtttcctgagaaacttgccatg
gagggaatgagcatgaagcaaggagagctttgcaaagctgttactgtgtctgttgtattg
catactgatggcagtatagcagaatatgaggtggataatactactattaagcccacctat
atgctgacttatgagagtgcatctgagcttctatatatgaacctagaagaggaggttgaa
ctgaaaattctgtctcaggctgcggctctccggtttcgatggcgtcggacacagggtgca
attgacacatcgacatttgaatcaagaattaaggtccttaacccagatgatccagatcca
tcaatcactctatatgttgaagaccaggctgaccctgcaatgcgacttgtctctgagatg
atgatactgtgcggagaagctatagcaacttatggttcttttcataacattccattaccc
ttcagaggacaaccccaatcaaatattgatgtatctgcattttcccatctgcctgaagga
ccggttaggagtgctgctattgttaaaataatgcgtgcagctgagatggatttcaggaac
cctatacggcatggtatcttggggattcctggttacgttcagttcacatctcccattcgc
agatatatggatcttcttgctcattatcaggtaaaggcctttcttagaggtgattctcca
ccttattcagctggtcagcttgaagggatggcatgcttagtgaacatgaatgttagatta
gtaaagaagctatacaacagcagccttcggtactggatattagaatatttacggcagcaa
ccaaacgaagcaacatttcgtggtttgatcctcagattcatcaaagataggatggcagcc
atattgttagttgaggtaggaatgcaagcttctgcagaggtttctgtagggctgcatgtt
ggtgatgtagtgaaatttcaggtggaagaagctcatccacgtgatgattttctctctttg
aaggaggttgatgaatgggcataa
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