Rhododendron vialii: 131326763
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Entry
131326763 CDS
T09330
Name
(RefSeq) E3 ubiquitin-protein ligase HAKAI homolog
KO
K15685
E3 ubiquitin-protein ligase Hakai [EC:
2.3.2.27
]
Organism
rvl
Rhododendron vialii
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rvl03019
]
131326763
04131 Membrane trafficking [BR:
rvl04131
]
131326763
04121 Ubiquitin system [BR:
rvl04121
]
131326763
Enzymes [BR:
rvl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
131326763
Messenger RNA biogenesis [BR:
rvl03019
]
Eukaryotic type
mRNA processing factors
3' end processing
N6-methyltransferase complex
131326763
Membrane trafficking [BR:
rvl04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
131326763
Ubiquitin system [BR:
rvl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
131326763
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
131326763
NCBI-ProteinID:
XP_058215621
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All DBs
Position
5a:39096643..39101360
Genome browser
AA seq
431 aa
AA seq
DB search
MKMLQIRLRSVQSVEGASGGKNVPVETVTVACPEHLILADLPVAKGLGSATATSLVKTVG
RRSRRQLGERVHFCVRCDFPIAIYGRLSPCDHAFCLDCARSDSICYLCDERIQKIQTIKM
MDGIFICAAPHCLKSFLKKTEFESHIHGTHADLLQRNIEKEDGGNDLEAASARQPTPSES
TARAPPRQVFSPRDSQPREPPLPRPIMQPKQQTSSFFGQVQNQSETPFPDYPPMHGHPPP
TFAVPINSNPVVGPPPFGYSPFPPEGSLQFYGSPYEIARPDSAPEVGAEQGSLLGFPPGQ
AVGANFSDGFPRPWIMGPTGQGMVDGFQVRPVFFPGDYGPNMGVLASNMVPPSTNKVVEQ
VQGGSGVDPRDGKGILAPQPLPFPPLPPPPGPHHLLQPNRDKSYSDHDMGRDGREFGWQH
ELHENFGSGQD
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgaagatgcttcagatccggcttagaagtgttcaatccgtagaaggggcctctggggga
aagaacgtgccagtggaaactgtgacagttgcatgtcctgagcacctaatccttgcagat
cttcctgtagcgaagggccttggctcagcgactgctacatcacttgttaagactgtcggt
cgcaggtcccgtcgccagcttggcgagcgagttcatttttgtgtccgctgtgattttcct
attgctatatatggacgcctgagcccttgtgaccatgccttctgtcttgattgtgcaagg
agtgattccatctgctatctctgtgacgaacgcatccaaaagattcagactatcaaaatg
atggatggcatcttcatctgtgctgctcctcattgtctcaagtccttcctaaagaaaacc
gaatttgaatctcacattcatgggacccacgccgaccttctccagcgcaacatagagaaa
gaagacggaggaaatgatttggaagctgccagtgccagacagcctacaccctctgagtcc
actgcccgagcgcccccaaggcaagtattctctcctagggactcacaacctagggagcca
ccactacccaggccaatcatgcaaccaaagcagcagacctcatcatttttcggtcaagtt
caaaatcagtcagaaaccccttttcctgattaccctccgatgcatggccatccaccacct
acttttgcagtgccaattaattcaaatccagttgtgggtccccctccatttggttactct
ccttttccacccgaaggaagtcttcaattttacggtagtccctacgagattgcacggcca
gattcagcaccagaagtaggagcagaacaggggtcgcttttgggttttccaccgggtcaa
gctgtaggagcaaatttctcggatggttttccgcggccatggattatgggacctacaggt
caaggaatggtggatggttttcaagtaaggcctgtgttctttccgggggattatgggccg
aatatgggagttttggcttcaaatatggttccaccttcgacgaataaggtggtggaacag
gtccagggtggaagtggtgtggaccccagggatgggaaaggtatattagcaccacagcct
ttgccatttcctccgctgcctccaccgccaggtccacatcatttattgcaacccaatcga
gataagtcgtactcagatcatgacatgggccgcgatgggagagagtttgggtggcagcat
gagttgcatgagaactttggaagtggccaggattag
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