Rhododendron vialii: 131326906
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Entry
131326906 CDS
T09330
Name
(RefSeq) serine/threonine-protein phosphatase PP1 isozyme 9
KO
K06269
serine/threonine-protein phosphatase PP1 catalytic subunit [EC:
3.1.3.16
]
Organism
rvl
Rhododendron vialii
Pathway
rvl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
131326906
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
rvl01009
]
131326906
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rvl03021
]
131326906
03019 Messenger RNA biogenesis [BR:
rvl03019
]
131326906
03041 Spliceosome [BR:
rvl03041
]
131326906
Enzymes [BR:
rvl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
131326906
Protein phosphatases and associated proteins [BR:
rvl01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
Catalytic subunits
131326906
Transcription machinery [BR:
rvl03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
131326906
Messenger RNA biogenesis [BR:
rvl03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
131326906
Spliceosome [BR:
rvl03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
131326906
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
STPPase_N
Motif
Other DBs
NCBI-GeneID:
131326906
NCBI-ProteinID:
XP_058215798
LinkDB
All DBs
Position
5a:27832451..27837264
Genome browser
AA seq
324 aa
AA seq
DB search
MNMMTMEGMMDKGVLEDIIRRLLEGKGGKQVQLSEGEIRQLCVNARQIFLSQPNLLQLHA
PVRICGDIHGQYQDLLRLFEYGGFPPEANYLFLGDYVDRGKQSLETICLLLAYKIRYPDK
IFLLRGNHEDAKINRIYGFYDECKRRFNVRLWKIFTDCFNCLPVAALIEEKILCMHGGLS
PELQNLDQIKEIERPADIPDSGLLCDLLWSDPDPRVEGWADSDRGVSCTFGADKVAEFLD
KNDLDLICRGHQVVEDGYEFFAKRRLVTIFSAPNYGGEFDNAGALLSVDESLMCSFEILK
PVDYRQSPGSSKLPLKKPPKIGKA
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgaatatgatgacgatggaggggatgatggacaagggagttttggaggatataataagg
agattgttggagggtaaaggagggaaacaggttcagttgtcagaaggtgagatccgtcag
ctgtgcgtcaacgctcgccaaatcttcctctctcagccaaatctcctccagctccacgca
cctgtccggatctgtggtgacatacatggacagtaccaagacctactgagactttttgaa
tatggtggttttcctccggaagcaaattacctctttcttggcgactatgtcgatcgaggg
aagcaaagcttggaaacaatatgtttgcttctggcctacaaaataagataccctgacaaa
attttccttctaaggggaaaccatgaagatgcaaagataaataggatttacgggttttat
gacgaatgtaaaaggagattcaatgttcgtctttggaagatattcacagattgcttcaat
tgtttgcccgttgctgctttgattgaggaaaagatactttgcatgcatggaggactttct
ccggagttgcaaaatttggaccaaataaaagaaattgagaggcctgctgatattccggat
agtggtctcctatgtgacctcttatggtctgatccagaccctagggttgagggttgggca
gatagtgatcgaggtgtttcttgtacttttggagctgacaaggtggctgagtttttggat
aagaatgacctagacctcatttgtcggggtcatcaggtggtggaggatgggtacgaattt
tttgctaaacgaaggcttgtaactatattctcagctccaaattacggtggggagtttgat
aatgcaggtgctctactgagtgttgatgaatccctaatgtgctcttttgagatattaaaa
ccagttgattacaggcaatctcctggcagttccaagttgcccctcaaaaagccccctaag
atcggaaaggcctga
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