KEGG   Rhododendron vialii: 131327258
Entry
131327258         CDS       T09330                                 
Name
(RefSeq) protein PIR isoform X1
  KO
K05749  cytoplasmic FMR1 interacting protein
Organism
rvl  Rhododendron vialii
Brite
KEGG Orthology (KO) [BR:rvl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rvl03019]
    131327258
Messenger RNA biogenesis [BR:rvl03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    eIF4F and regulatory proteins
     131327258
   Factors involved in mRNA localization
    Other mRNA localization factors
     131327258
SSDB
Motif
Pfam: FragX_IP CYRIA-B_Rac1-bd
Other DBs
NCBI-GeneID: 131327258
NCBI-ProteinID: XP_058216301
LinkDB
Position
5a:33360028..33435863
AA seq 1286 aa
MAVPVEEAIAALSTFSLEDEQPDVQGPGVWVSTERGATNSPIEYTDVSAYRLSLSEDTKA
LNQLNTLIHEGKDMASVLYTYRSCVKALPQLPDSMKQSQADLYLETYQVLDLEMSRLREI
QRWQGSAASKLAADMQRFSRPERRINGPTITHLWSMLKLLDILVQLDHLKNAKASIPNDF
SWYKRTFTQVSMQWQDNDSLREELDDLQIFLSTRWAILLNLHVEMFRVNNVEDILQVLIV
FAVESLELDFALLFPERHILLRVLPVLVVLATSSEKDSESLYRRVKINRLINIFKNDPVI
PAFPDLHLSPAAILKELSMYFPKFTAQTRLLTLPAPHELPIREAQEYPRHYLIINHIGAI
RAEHDDFIVRFASAMNQLVLLKSMDGADVEWCKEVKGNMYDIVVEGFQLLSKWTARIWEQ
CAWKFSRPCKDAVPNMSHEMVTSSSDYEKVVRYNYSSEERKALVELVSYIKSVASMMQRC
DTLVANAVWETIHAEVQDFVQNTLATMLRTTFRKKKDLSRVLSDMRTLSADWMANTSKPE
SEVQPLQHGGEESKGNFFYPRPVAPTAAQVHCLQFLIYEVVSGGNLRKPGGLFGNSSSEI
PVNDLKQLETFFYKLSFFLHILDYTETVASLTDLGFLWFREFYLESSRVIQFPIECSLPW
MLVDHVIEAHSTGLLESVLMPFDIYNDSARQALAVLKQRFLYDEIEAEVDHCFDIFVSTL
CDTIFTYYKSLAASSLLDSSFLFSVENGEKFSVQPMRFTALLKMTRVKLLGRTINLRSLI
AGKMNKIFRENIEFLFDRFESQDLCAIVELEKLLNILQLGHELLSRDLSIDSFSLMLNEM
QENISIVSYSSRLASQIWSEMQIDFLPNFTLCNTTQRYVRSSKVPPASLQKPTIPHSKPS
FYCGTQDLNSAHQSSARLHSGFFGMPHMFSVVRLLGSRSLPWLIRALLDHVSNKITTLEP
LITGLQDALPKSIGLLPFDGGVTGCLRIVKEHLNLGSKSELKAEVLRGIKEIGSVLYLMG
LLDIVLREVDTTHFMQTAPWLGLIPGADGQILQAQEGADSPIVTLFKSATAATVSNPGLS
TQTSFYTISKQAEAADLLCKANMNTGSVLEYALAFTSAALDKYCTKWSAAPKTGFIDITT
SKDFYRIFSGLQIEYLEESVQVPPSHHEVLGDSVAWGGCTIIYLLGQQLHFELFDFSYQV
LNIAEVEAVSITQTPKNSPSAQGWQALLEAMKKARRLNNHVFSMLKARCPLEDKQACAIK
QSGAPLHRVKFENTVSAFETLPQKGS
NT seq 3861 nt   +upstreamnt  +downstreamnt
atggcggttcctgtcgaagaagccattgcagcattgtctactttctcgctggaggatgag
caaccagatgttcaagggccaggagtttgggtgtcaactgagagaggtgcaacaaatagt
ccaattgagtataccgatgtttctgcgtaccgcctatcattatcagaagataccaaggct
ctcaatcaactgaacacccttattcatgagggaaaggatatggcatcagtgctctatact
tatcgaagttgtgtcaaagcacttcctcagcttccagattccatgaagcaaagccaggct
gacttatatctagaaacatatcaagttctagacctggaaatgagtcgactgcgtgaaatt
cagcgctggcaaggatcagctgcatctaaactagcagctgatatgcaacgcttttctagg
ccagagaggcgtatcaacggccctactataactcatctctggtccatgttgaagttactt
gatattttagtgcaactggatcatcttaaaaatgcaaaagcaagcataccaaatgatttt
tcctggtataagaggaccttcactcaagtcagtatgcagtggcaagacaatgactcattg
agagaagagttagatgatcttcagattttcttgagcacaagatgggcgattttgttgaac
ttgcatgtcgagatgttccgcgtaaacaatgtagaggacattcttcaggtcctcatagtt
tttgctgtggagtcactggagttggattttgcacttctgtttccagagcggcatatcctt
cttcgggttttgccagttcttgttgtacttgcaacgtcatcagagaaagacagtgagtca
ctatataggagggtgaaaatcaatagactgatcaatatattcaagaatgatccagtcata
cctgcattcccggatcttcatctttctcctgctgcaattttgaaagagttgtctatgtat
ttccccaaattcactgcccaaactcgtcttctcactcttccagcccctcatgagcttcca
atccgtgaagcacaagaatatcctcgacattatctgatcatcaatcatattggagcaatt
cgcgctgaacatgatgacttcatagtccgtttcgcttcagctatgaaccagctagtgtta
ctgaaatcaatggatggtgcagatgttgagtggtgcaaggaagtcaaagggaacatgtat
gacatagttgttgaaggttttcagcttttaagcaagtggactgctcgaatttgggagcaa
tgcgcatggaaattctctcgtccctgcaaggatgcagttcctaatatgtcacatgagatg
gtgacatcatcttctgactatgaaaaggttgtacgatataattacagttcagaggaaagg
aaagcattggttgaacttgttagctacattaagagcgttgcatcaatgatgcaacgatgt
gatacattggtagctaatgctgtatgggaaacaatccatgcagaagtccaggattttgtg
caaaatacattagccactatgttgcggacgacctttcgaaagaagaaggacctaagtagg
gttctttccgatatgcgcacactttcagcggactggatggcaaatacaagcaaacctgaa
tctgaggtacaacccttacaacatggaggcgaagaaagcaaagggaacttcttttatcct
aggccagtggcacccactgctgcacaggtgcactgcttgcagtttctgatatatgaggtc
gtctcaggtggtaatctgaggaagcctggggggctctttgggaatagcagctccgagatt
cctgttaatgatttgaaacaactcgaaactttcttctacaagcttagctttttcttgcat
atattagactatacagaaactgttgcaagtctgacagatcttggttttttgtggttcaga
gagttttatttggagtcttctcgtgttattcagtttcctattgaatgctctcttccctgg
atgctggtggatcatgtgattgaggcgcatagtactggccttttggagagtgttttaatg
ccatttgacatttataatgattctgctcggcaagcgctggctgttctcaagcaacgcttc
ctctatgatgaaattgaagctgaggttgatcactgtttcgatatatttgtttccacactg
tgtgacactatttttacttactacaaaagtttggctgcaagtagtttacttgattcctca
tttcttttctccgtagagaatggggaaaagttttctgtccaacctatgagattcactgct
ctactaaagatgactcgagtgaagttattgggaaggacaattaacctaagaagtctgatt
gctggaaagatgaacaaaatattcagggagaatattgaatttttgtttgacaggtttgag
tctcaggacctgtgtgctattgtggaattggaaaagcttctgaatatcttgcaacttggt
catgaattgctgtccagagatctttcaatagactcattcagtctcatgttaaatgagatg
caggagaatatatctatcgtgtcatattccagtagacttgcttctcagatttggtcggag
atgcaaattgattttttgccaaacttcacgctctgtaatactactcagagatatgttcgt
tcatcaaaagtaccccctgcttctcttcagaagcctacaattccacattcaaagccgagt
ttttactgtggtactcaggatctaaattctgcacaccaaagctctgcgcggttgcatagt
ggattctttggaatgcctcacatgttttccgtcgtgaggctcttaggatctagatcatta
ccttggctcatccgtgctctactggatcatgtatcgaataagataactacccttgaacca
ttgattacaggattgcaagatgcactgccgaagtctattgggcttcttcctttcgatggt
ggagtaacaggttgtttgaggattgtcaaagaacatctgaatttggggtcaaaatcagaa
cttaaagcagaggttctacgtggaataaaggagatcggaagtgtattatacttgatgggg
cttcttgatattgttctgagagaagtagataccactcatttcatgcaaacagctccgtgg
ttgggcttgattcctggtgcagatgggcaaatattgcaggcccaagaaggggcagatagc
cctattgtcactctcttcaaatcagcaactgctgcaactgtgtcaaatcctgggctctca
actcaaacatcattctacaccatatcaaaacaggcagaagctgctgatctgttgtgcaaa
gcgaacatgaacactggaagcgtgctggaatatgcccttgcttttacaagtgcggcattg
gataaatattgtactaaatggagtgcagctccaaagacggggtttattgacattacaact
tccaaagacttctatcgcatatttagtggccttcaaatcgaatatctggaggaatctgtt
caagtaccaccaagccatcatgaagtgctgggggattcagtagcctggggtggttgtact
ataatatacctgcttggccaacaactgcactttgaactttttgatttttcctatcaagtc
ctgaatattgctgaagtggaagctgtatcaataacacagactccgaagaattctccttct
gcacaggggtggcaagcattgttagaagcaatgaagaaagcaaggaggttgaataatcac
gtattttctatgctgaaagcacgctgcccgctggaagacaaacaagcatgcgccatcaag
caaagtggcgcccctctacatcgcgtcaagtttgagaacacagtgtctgcatttgaaaca
ttgccacaaaaaggttcttag

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