Rhododendron vialii: 131327290
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Entry
131327290 CDS
T09330
Name
(RefSeq) probable E3 ubiquitin ligase SUD1
KO
K10661
E3 ubiquitin-protein ligase MARCH6 [EC:
2.3.2.27
]
Organism
rvl
Rhododendron vialii
Pathway
rvl04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
131327290
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rvl04121
]
131327290
Enzymes [BR:
rvl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
131327290
Ubiquitin system [BR:
rvl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
March proteins
131327290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MARCHF6_C
RINGv
zf-RING_2
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
131327290
NCBI-ProteinID:
XP_058216364
LinkDB
All DBs
Position
5a:10732058..10741931
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AA seq
1071 aa
AA seq
DB search
MEIAASLDPVVNPSTSSPGINPPTNQNDDDEEGDVCRICRNPGDTENPLQYPCACSGSIK
FVHQDCLLQWLNHSSARQCEVCKHAFSFSPVYAKDAPARLPFQEILVGMAMKACHVVQFL
LRLIFVLTVWLLVIPFITYWIWRLSFVKSFGEAQSLFLSHISSTAFLTDCLHGFLLSASI
VFIFLGATSLRDYFRHLREIGGQDADREDGDRNGARAARRPPGHANRNLAGEANGEDGGG
AQGVAGAGQIIRRNAENVAARLEMQAARLEAQVEQMFDDLDDADGAEDVPFEELVGMQGP
VFHLLENALTVLVSNVVFLGFVIYVPFWLGRIILHYLSWVLSSATSPVLSTVLPLMESAL
SFANITLKNALAAVANLTPDNQENSFLGPVAEMLNANSTRPQESSNNLSTLLSADIMSGA
SAGTSRLSDVATLAVGYMFVISLVFLYLGIVALIRYTRGEPLTMGRFYGIASLAETIPTL
FRQFVAAMRHLMTMIKVAFLLVIELGVFPLMCGWWLDICTIRMFGKSIAQRVDFFSVSPL
ASSLVHWGVGIVYMLQISIFVSLLRGVLRKGVLYFLRDQTDPNYNPFRDLIDDPVHKHAR
RVLLSVAVYGSLIVMLVFLPVKIAVRMAPSIFPLDVSVSDPFTEIPADMLLFQICIPYAI
KHFKLRVTIKSILRYWFTVVGWVLGITDFLLPRPEDNGGLENGNGEPARPDRPGGHAADD
LNRGRLVLANTDLEEEYDGDEPADSERYVFVLRIVLLLVMAWMTLLIVNSALVVVPVSIG
RTLFNRIPLLPVTHGVKCNDLYSFAIGVYIIWTALAGARYSIEHVKTRRAKVLLKQIWKW
CVIILKSSALLSIWVFVIPVLIGLLFELLVIVPMRVPVDESPVFLLYQDWALGLIFLKIW
TRMVMLEQMVPLVDEGWRVKFERVREDGFSRLQGFWVLREIVLPITMKLLTALCVPYVLA
RGVFPVFGYPLLVNSAVYRFAWLGCLGFSILCFCAKRFHVWFTNLHNSIRDDRYLIGRRL
HNFGEDSGRRQSETGSLEARNSDTQGTGLIRQDRDGLDGGLRLRHLDRQNA
NT seq
3216 nt
NT seq
+upstream
nt +downstream
nt
atggagatcgccgcgtcactcgatcccgtcgtgaacccttccacttcttcgccgggaatt
aatccgccgaccaatcaaaacgacgacgatgaagagggagatgtttgtcgtatctgccgt
aatccaggagacacggagaaccctctccagtacccttgcgcctgcagcggcagcatcaag
ttcgttcaccaagactgcctcctccagtggctcaatcacagcagcgcccgccaatgcgag
gtctgcaagcatgcattttcgttctcacctgtttatgctaaggatgctccagcgaggctt
ccttttcaggagattttggtggggatggccatgaaagcgtgccatgttgtgcaatttttg
ttgcgccttatttttgtacttacagtttggctccttgtcattcccttcattacatattgg
atctggcgattgtcatttgtgaagagttttggtgaagctcaaagtcttttcttgagtcat
atatcttctacagcctttctgactgattgtctgcatgggttcctactttctgcaagcatt
gtgtttatttttcttggagccacgtcgttgagggattatttcaggcatttacgagaaatt
ggagggcaggatgctgacagagaagatggagatagaaatggtgctcgtgctgcaagaaga
cctcctggacatgctaataggaatttagcgggtgaagcaaatggggaagatggtggtggg
gcacaaggagttgctggagctggtcaaataatcagaaggaatgcagaaaatgttgctgct
aggttggagatgcaggcagctcgtcttgaggctcaagtcgaacaaatgtttgatgatttg
gatgatgctgatggtgcagaggatgtacccttcgaggagctagttgggatgcaggggcct
gttttccatttgctggaaaacgcactcactgttcttgtcagcaacgtggtattccttggg
tttgtcatctatgtgcccttttggttgggacgaattatacttcattatctgtcatgggtg
ttgtcctctgctactagtccagtgctgtcaacggtattgccgcttatggagtccgccctt
tccttcgccaatataacattgaagaatgcacttgctgctgttgctaatttgacccccgat
aaccaagaaaatagttttcttggcccagttgctgaaatgttgaatgcaaattctacaaga
ccacaagaatcatcgaataatcttagcacattactctcagctgatattatgagtggtgca
tctgctggaacatcacggctttctgatgttgctactcttgctgttggatacatgtttgta
atctctttggtctttctctatctcggtattgttgcactgattcggtacactaggggtgag
cccttgacaatgggtaggttctatggtatagcttcattagcagagacaatacccacccta
ttcaggcagtttgtggcagcaatgagacatttaatgaccatgattaaggttgctttcctt
ctggtcattgaactgggtgtttttcctctgatgtgcggatggtggctggatatttgtacc
ataagaatgttcgggaagtcgattgctcaaagagttgatttcttttcagtctctccatta
gcaagctcgttggtccattggggtgtaggaatcgtgtatatgctacaaataagtatcttt
gtcagccttcttcgaggggttttgcgcaaaggcgttctttactttcttcgagatcagacc
gatccaaattacaaccccttccgtgatctgattgatgatcctgtgcacaaacatgctcgt
agggttttgctgtctgttgctgtttatggtagtttgatagtgatgctggtatttttaccc
gttaaaattgctgtacgaatggcaccatcaattttcccgctggatgtctctgtatctgac
ccattcactgaaatccctgctgatatgcttctctttcaaatctgcattccatatgcgatt
aagcattttaagttgcgtgtaacaatcaagtccattctccgctactggtttaccgtagtt
ggatgggtgctgggtataacagatttcttactgcctagacctgaggacaatggtggtctt
gaaaacggaaatggggagccagcaaggccggatagaccaggaggacatgctgctgatgat
ttgaacagaggcaggctagtattagcaaacactgatcttgaagaagagtatgatggtgat
gaaccagctgactcagaaaggtacgtatttgtgcttcggattgtgctgttgttggtgatg
gcttggatgactctacttatagttaactctgccttagtagttgtaccagtttctattgga
cgtacacttttcaaccgcatccctcttctcccagtaactcatggggtcaagtgcaatgat
ttatattcttttgccattggagtctatattatttggactgccttagctggggctaggtat
tccattgagcacgttaaaacaaggagggctaaagttctgctaaaacaaatttggaaatgg
tgtgtcattattttgaagagttccgcattgctgtcaatatgggtttttgtcatcccggtg
ttaattggactgctctttgaacttttggtaattgtgccaatgcgggtgcctgtggatgaa
agcccagttttccttttgtatcaggactgggctttgggactcatttttcttaagatctgg
actagaatggtcatgctggagcaaatggtgcctctggtggatgagggttggcgtgtaaag
ttcgaaagggtgagagaagatggtttctccaggctgcagggcttttgggtactgcgtgag
atagttctgccaattactatgaagctgcttactgcactgtgtgttccctatgttttggcc
cgaggggtgtttcccgtatttgggtacccattgttggttaactcggcggtgtatcgattt
gcctggctgggatgccttggtttcagcattttgtgcttttgcgccaagaggttccatgtc
tggttcaccaacctccataactctattcgcgatgatcgctatttgatcggtcgtaggctt
cataactttggagaggattcggggagaaggcaaagtgaaacgggttctttggaagcacga
aattccgatacccaggggactgggttaattaggcaggaccgcgatggattagatggaggg
ttgagacttaggcatcttgaccggcaaaatgcctga
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