Rhododendron vialii: 131327568
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Entry
131327568 CDS
T09330
Name
(RefSeq) LOW QUALITY PROTEIN: uncharacterized protein LOC131327568
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
rvl
Rhododendron vialii
Pathway
rvl03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
131327568
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rvl03021
]
131327568
Transcription machinery [BR:
rvl03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
131327568
Prokaryotic type
Archaeal type
TFE
131327568
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIE_alpha
Sgf11
Zn_ribbon_IS1595
Cas12f1-like_TNB
HVO_2753_ZBP
Zn_ribbon_8
Ogr_Delta
Zn_ribbon_PaaD
Zn_ribbon_3
DUF7575
DASH_Dad2
zf-C2H2
Motif
Other DBs
NCBI-GeneID:
131327568
NCBI-ProteinID:
XP_058216703
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All DBs
Position
5a:complement(11635055..11636697)
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AA seq
398 aa
AA seq
DB search
MWSGQVAGSSRTRPVHTANRDYMLNMGIDPGKAVVTQVPYECGNRSGIGTRAINNDIENP
PETGRSDNRGIAVVILDALTRRXXVREKDLAKDLKLQSKQLHRTLRFFEEEKLVTRDHRK
EAAKIYSAATADGXHGREGEEKIKLQHTDQSYCCLDYAQIYDVVRYKLHRMRKKPKDEIQ
NKKTVQEYRCPNCGKSYTAMNALQLIASLKDEYFHCKSCNRELVAESDNLAAAREMGDGL
KDMLRKLEEQLKPLKDQLGKVKDVPVPEFGNLHAWAIRRANARRVSAXGFGGTPPMPFVG
KTKVEVAFCGVDDQEERTLDTESENSNSATKVLPPWMIKQGMNLTKEQRGLDKKPLTQNI
DLQVGSKSKRDDNEGDEVMDQWEEAAPAGNTGESYKGE
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atgtggtcgggtcaggtggcgggttcgagccgaacccgacccgtgcacactgctaatcgt
gactatatgttgaatatgggaatagacccgggtaaagccgtggtgacccaagtgccctat
gaatgtgggaatagatccggaattggtacgagggctattaacaatgacatcgagaatccg
cccgaaactgggaggagcgacaatcgaggcattgctgtggttatactcgatgctctcacc
agacgctagtaggtaagagagaaagatttagcaaaggacttgaagctacaatcaaagcaa
cttcatcgaacactgcgattcttcgaagaagaaaagctagtcactagggaccataggaaa
gaggcagcaaagatatatagtgctgccacagctgatggttagcatgggcgagagggagaa
gaaaagattaagctgcagcacactgatcaatcctattgttgtttggactatgcacagata
tatgatgtcgtgaggtacaaactgcaccgaatgaggaagaagccaaaagatgagatccag
aacaagaagactgttcaggagtatagatgccccaactgcggaaagagttatactgctatg
aatgcactgcaacttattgcttctctcaaggatgaatattttcattgcaaaagttgtaac
agggaacttgtggctgagagtgacaatttagctgctgctcgagaaatgggggatgggctg
aaggacatgcttcggaagctggaggaacagcttaagccactaaaggatcaactcggcaaa
gtaaaagatgtgccagttcccgaatttggaaatctccacgcgtgggcaattcgtcgtgcc
aatgctaggcgtgtatctgcctaaggttttggtggaacaccgcctatgccatttgttgga
aaaacaaaggttgaagtagccttttgtggtgttgatgatcaagaggagaggacactggac
acggaatctgagaattcaaattcagctacgaaagttctgcctccttggatgatcaagcaa
ggaatgaaccttacaaaagaacaacgtggattggacaaaaagccactgactcaaaatatt
gatcttcaagttggcagcaagtccaaacgtgatgacaatgaaggagatgaagttatggat
cagtgggaagaagctgcacctgcaggcaatacaggcgaaagttacaagggtgaatga
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