Rhododendron vialii: 131328028
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Entry
131328028 CDS
T09330
Name
(RefSeq) protein RMD5 homolog
KO
K23333
E3 ubiquitin-protein transferase RMND5 [EC:
2.3.2.27
]
Organism
rvl
Rhododendron vialii
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rvl04121
]
131328028
Enzymes [BR:
rvl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
131328028
Ubiquitin system [BR:
rvl04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
CTLH complex
131328028
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CTLH
zf-RING_UBOX
zf-C3HC4_4
zf-RING_2
zf-RING_5
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_2
Prok-RING_4
DegS
Motif
Other DBs
NCBI-GeneID:
131328028
NCBI-ProteinID:
XP_058217129
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Position
5a:12347806..12357529
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AA seq
385 aa
AA seq
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MELNTIRDSFDRVTKKQKLSTSKSLEVIDQIGHEIEQALANIHSIQGSTSPADQKSILME
LKTKLNAIGPHNQLEESQKELNTNLSKYQKTLDKYFNPDISKAYRNVDYDPHILNHIIVS
HFYRVGFFDVADCLITEAAEPEAVSIKSQFLELHKILKAMRARDLEPALYWTSTNRECLN
RIGSNLELKFHRLQYVEILQSGTQADALNYARNHLSPFASLHMDEIRKLVGCLLWVGKLD
KCPYSELFSENHWEKLAEELTRQFCSFLGQSYESPLSVAVAAGVEGLPTLLKLTNVMAVK
KQEWLAMKQLPVPVDLGKEFQFHSIFVCPVSREQGNEENPPMLLPCGHVLCKQSIMKLSK
SSTRTFKCPYCPHEASVAQCRQLYV
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atggagctgaataccatcagagattcatttgatcgagttactaagaagcaaaagttgtct
acttccaaatccctggaagtaatagaccaaattggccatgaaattgaacaggcactggca
aatatccactccattcaaggctccacctctccagctgatcagaaatccattctcatggaa
cttaaaaccaagctgaatgcgattggcccacacaaccagctagaggaatcccagaaggag
ctaaacacaaacctaagcaagtaccagaaaacccttgataaatatttcaaccctgacatt
tccaaagcatacagaaatgttgactacgacccccacatattgaaccatatcatagtaagc
catttttaccgagtgggtttctttgatgtcgcggactgcttaataactgaggctgcagaa
ccagaggctgtttccatcaaatcacaatttctagagttgcataaaatattgaaagctatg
agggctagagaccttgagcctgctctctactggacctccaccaaccgcgaatgcctcaac
cggatcggttcaaatctagaactgaaatttcacaggctacaatatgtggagattttgcag
agtgggacacaagcagatgcgctgaattacgcccggaaccacctttctcctttcgcttcc
cttcacatggacgaaatccggaagctcgtgggttgccttttatgggtaggaaagctagac
aaatgcccttattcggagttattctcagaaaaccattgggagaagttggcggaagagttg
actcggcagttctgcagtttcttggggcagtcctatgagagcccattgagtgttgcagta
gccgctggagtggaaggattgccaacgttattaaagctgacgaatgtcatggctgttaag
aagcaggagtggttggcaatgaaacaactgccggtgcctgtggatttgggtaaggagttt
cagttccattcaatatttgtgtgtccagttagtagggaacaagggaatgaggagaatccg
cctatgctattaccctgcggtcatgttttatgcaagcagtctattatgaaactttccaaa
agcagcacacggacatttaagtgtccatattgtccccatgaggcttcagttgcacagtgc
aggcagctttatgtctga
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