KEGG   Rhododendron vialii: 131328839
Entry
131328839         CDS       T09330                                 
Name
(RefSeq) protein SPA1-RELATED 3-like isoform X1
  KO
K26557  protein SPA1-related 3/4
Organism
rvl  Rhododendron vialii
Pathway
rvl04712  Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:rvl00001]
 09150 Organismal Systems
  09159 Environmental adaptation
   04712 Circadian rhythm - plant
    131328839
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:rvl04121]
    131328839
Ubiquitin system [BR:rvl04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Multi subunit type E3 associated proteins
    131328839
SSDB
Motif
Pfam: WD40_CDC20-Fz WD40 WD40_Prp19 WD40_WDHD1_1st Beta-prop_TEP1_2nd Beta-prop_EML_2 WDR55 EIF3I Beta-prop_EIPR1 WD40_MABP1-WDR62_2nd Beta-prop_RIG_2nd Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd ANAPC4_WD40 Beta-prop_CAF1B_HIR1 Beta-prop_EML Beta-prop_WDR19_1st Pkinase WD40_MABP1-WDR62_1st Beta-prop_IFT140_1st Beta-prop_SCAP Beta-prop_WDR35_TULP_N Beta-prop_WDR75_1st WDR90_beta-prop_4th Beta-prop_DCAF12 WD40_RFWD3 WD40_like PK_Tyr_Ser-Thr
Other DBs
NCBI-GeneID: 131328839
NCBI-ProteinID: XP_058217763
LinkDB
Position
6a:complement(38309794..38320203)
AA seq 896 aa
MTMEGSSESGWQKSDSSRGFKASSVSDRNPRLFRGNRIRSSGDASQDSGSIPVRKERDRV
VLAHRDLHRNPFGLSGVCEDELGRGPVVRAIEWNDVSLRQWLDDPERSVDATECLHIFTQ
IVEIVNLAHSQGVVVNNVRPSCFVMSSFNHVSFIESASCSSESGSDSMEDMSNGQTAECK
RSSSPLPHGSHRHRSHFGTERLEMNQTNASQVASESSCLQSSSVYPMHKSLEVGSDVKQA
EEKKHSFPMKQILLMESNWYTSPEEVAGAPSSCASDVYRLGVLLFELFCTFSSAEEKSST
MSSLRHRVLPPQLLLKWPKEASFCLWLLHPDSCSRPKMSELLQSEFLNEPREDIEEREVA
IELRERIDEQELLLEFLLMIQQRKQEAAINLQDSISFLSSDIEEVTKQQSLLWRRGGSCP
ELGKDSASSLPSIEVVDNGDSSGLASRKRYRPGLQNQNEEESGDCVHNCENSEEPAENQG
SFLSKSSRLMKDFKKLESAYFLTRRRSIKSTGKPVTRQSPISSDGRRSIVVTERSSINNL
PSVNQCSEVRQSGWVNSFLEGLCKYLSFSNLKVKADLKQGDLLNSSNLVCSLSFDRDGEF
FATAGVNKKIKVFEYATVLNEDRDIHYPVVELSSRSKLSSICWNSYIKSQIASSNFEGVV
QVWDVTRSQVFMEMREHERRVWSVDFSLADPTMLASGSDDGSVKLWNINQGVSVGTIKTK
ANVCCVQFPVDSSRSIAFGSADHKIYYYDLRNSKMPLCTLIGHEKTVSYVKFIDSTNLVS
ASTDNTLKLWDLSMCTSRVLDSPLQSFTGHTNVKNFVGLSVSEGYIATGSETNEIFIYHK
AFPMPALAFKFGSRDPISGDEVDDNAQFISSLCWRRQSSTLVAANSMGNIKLLEMV
NT seq 2691 nt   +upstreamnt  +downstreamnt
atgactatggagggttcatctgagtctggttggcagaagtctgatagttctaggggattc
aaagcttcttctgtctcggatagaaaccctagactgtttcgtggcaacagaattaggtcc
tcaggagatgcatctcaggattctggctcaatacctgtcagaaaggagagagatagggtt
gtgttggcgcatagggatctccatagaaacccttttggcctttctggagtttgtgaggat
gagttagggaggggcccggttgttcgtgccattgaatggaatgatgttagcttgagacaa
tggttggacgacccagaacgatcagttgatgccactgaatgcttgcacatatttacgcaa
atagtagagattgttaacctggcacattcacaaggagttgttgtcaataatgtacggcct
tcgtgctttgtcatgtcatctttcaaccatgtctctttcattgagtctgcatcttgttcg
tcagaatcaggttcagattccatggaggatatgtcaaatggccaaacagctgagtgtaag
agatcatcttcacctttgccccacggttcacatcgacatagaagccactttggaacagaa
agactggagatgaatcaaacaaatgcttcccaagtggcttcggaaagtagttgcttgcag
tcaagttctgtctacccaatgcataaatccttggaggtaggcagtgacgttaaacaagct
gaagaaaagaagcattcatttcccatgaaacagattttgcttatggaaagcaattggtac
actagtccagaagaagttgctggtgctcctagttcttgtgcttctgatgtttatcgattg
ggagtcctcctttttgagttattctgtacgtttagttcggcagaagaaaagagttcgact
atgtctagtctgagacaccgcgttcttcctccacagttactactgaaatggccaaaagaa
gcttcattttgtttgtggttactgcatcctgactcatgtagtcggccaaaaatgagtgag
ttgttacaaagtgagttcctgaatgaaccaagagaagacatagaggaacgtgaagtagca
atagagcttcgagagagaatagatgagcaggagttgttgctggagttccttttgatgata
caacaaagaaaacaggaagctgctattaacttgcaagattcaatttccttcctatcttct
gatatagaagaagttacaaagcagcagtcgcttctttggagaagaggaggctcttgtcca
gaattaggcaaggattccgcttctagtctcccttcgatagaagttgttgacaatggagat
tctagcggtttagcttccagaaaaagatacagacctggacttcagaatcaaaatgaagag
gaatctggtgattgtgtgcataactgtgagaactcagaggaacctgctgaaaatcaagga
agttttctctcaaaaagttctcgattgatgaaggactttaagaaactggagtcagcttat
tttttgaccagacgcaggtctataaagtccacaggaaaaccagtaactcgacaatctcca
attagcagtgatggtagacggtccattgttgtaactgaaagaagttcaatcaataatttg
ccctctgtgaatcagtgtagtgaagttagacaaagtggatgggtaaattccttccttgag
ggattgtgcaagtatctgtctttcagtaatttaaaagtgaaggcagacttgaagcaaggg
gatcttttaaattcttccaacctagtatgttctctgagtttcgatcgcgatggggaattt
tttgcgacggctggtgtgaataagaagatcaaagtatttgaatatgccacagttttgaac
gaagatcgtgatatccactatcctgtggttgaattatctagtagatcaaaattaagtagt
atatgttggaatagttatatcaagagccaaattgcttcaagtaactttgaaggagtggtt
caggtatgggatgttacaagaagtcaagtttttatggaaatgagagagcatgaaaggcgt
gtgtggtctgttgacttctcattagcagatccgacaatgttggccagtgggagtgatgat
ggttctgttaagctctggaatatcaatcagggagtaagtgttggtaccattaagacaaag
gccaatgtctgctgtgttcagttccctgttgattctagtcgttccattgcatttggttcg
gcagatcataagatttattactacgatctccgaaactcgaaaatgccactgtgcacattg
attggacacgaaaagactgtgagctacgtgaaattcatagattcgacgaaccttgtctca
gcatccacagataacacactaaagctttgggatttgtcaatgtgcacatctcgagttctt
gacagtcctctccagtcattcacaggtcacacgaatgtgaagaattttgtaggtttatca
gtgtctgagggatacattgcaactggctcagaaacaaatgagattttcatctaccacaaa
gctttcccaatgccagcattggcattcaagttcggaagcagagatccaatttctggggat
gaagtagatgacaacgcacagttcatatcgtctttgtgttggcgtcgtcagtcatccacc
ttagttgctgcaaattccatgggaaatatcaaacttttggaaatggtttga

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