Rhododendron vialii: 131328844
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Entry
131328844 CDS
T09330
Name
(RefSeq) protein FORGETTER 1 isoform X1
KO
K26273
protein strawberry notch
Organism
rvl
Rhododendron vialii
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rvl03036
]
131328844
Chromosome and associated proteins [BR:
rvl03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
131328844
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
Zn_ribbon_FGT1_1
Zn_ribbon_FGT1_2
SBNO
ResIII
PHD
PHD_4
DmmA-like_C
Zot
C1_1
Motif
Other DBs
NCBI-GeneID:
131328844
NCBI-ProteinID:
XP_058217778
LinkDB
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Position
6a:43879140..43906461
Genome browser
AA seq
1244 aa
AA seq
DB search
MGQPSVPPPPTLAPPPAAALPGGGGCQVRCAGCRMILAVGPGLTEFVCPTCQLPQMLPPE
LMRAPPRTVPAHGIDPTKIQLPCAHCKAILNVPHGLSRFACPQCGVDLAIDLSKSQHFFP
PPSRPPPPEEVNEVAIEVEREEDEGGLVGETFTDYRPPKISIGPPHPDPIVETSSLSAVQ
PPEPTYDLKIKDELESSKVLSCLQIETLVYACQRHLQHLQNGARAGFFIGDGAGVGKGRT
IAGLIWENWHHGRRKALWISVGSDLKFDARRDLDDVNAMCIEVHALNKLPYSKLDSKSVG
VREGVVFMTYSSLIASSEKGRSRLQQLVQWCGPEYDGLLIFDECHKAKNLVPEAGGQPTR
TGEAVLEIQARLPQARVIYCSATGASEPRNLGYMVRLGLWGAGTCFSNFHEFLGALEKGG
VGALELVAMDMKARGMYVCRTLSYEGVEFEVIEAPLEAKMMEMYIKAAEFWAELRVELLS
ASAFLSTEKPNSSQLWRLYWANHQRFFRHMCMSAKVPAVVRLATKALVENKCVVIGLQST
GEARTEEAVTKYGLELDDFISGPRELLLKFVEENYPLPEKPEVLPGEESVKELQRKRHLA
TPGVSFKGRVRKVAKWRAASDAESEDESETDSGNESTESDDEFQICEICNSEEERKKLLK
CSCCGQLVHPACLVPPVVDAVAVDWSCHSCKEKTDEYLHAKQAYVAELLKRYEGAMERKL
KILEIIRSLDLPNNPLDDIIDQLGGPDKVAEITGRRGMLVRASGGKGVTYQARNTKDVTM
EMVNMHEKQLFMDGKKLVAIISEAGSAGVSLQADRRAVNQKRRVHLTLELPWSADRAIQQ
FGRTHRSNQASAPEYRLLFTNLGGERRFASIVAKRLESLGALTQGDRRAGPSLSAYNYDS
AYGKRALMVMYRGIMEQDALPVLPPGCSSDKPDTIQEFMIKGKAALVSVGIVRDTSWGNG
KDSGKLSGRIVDSDMHDVGRFLNRLLGLPPEIQNRLFELFVSILELLIQNARVEGHFDSG
IVDMKANIIEQQGTPKTVHVDHLSGASTVLFTFTLDRGITWESASVLLEEKQKDGLGSPN
DGFFESKREWLGRRHFLLAFEGSASGLYKIVRPAVGEALREMPLAELKNKYRRISELEKA
RSGWEDEYEVSSKQCMHGPKCKIGSFCTVGRRLQEVNILGGLILPVWGTIERALAKQARQ
SHKRLRVVRIETTTENQRIVGLLIPNAAVESVLQDLAWVQDIDD
NT seq
3735 nt
NT seq
+upstream
nt +downstream
nt
atggggcagccttcggtgcctcctcctcctacgttggccccaccacctgcggcggcgctg
ccaggcggaggtggatgccaagttcgttgcgccggttgccgaatgatcttggctgtgggc
cccggattgacggagtttgtttgccctacgtgtcaattaccacagatgctgccgccggag
ctgatgcgggccccaccgcgcaccgttccggctcatggcattgatcctacgaagatccag
ctaccttgcgctcactgtaaggccatcctcaacgttcctcacggcctctctcggtttgct
tgccctcagtgtggtgtcgacctcgccattgatctctccaaatctcagcatttcttccct
cccccttctcgaccgccgccacctgaggaagtcaacgaggtagccattgaagtggaacgg
gaagaagatgaaggtggcttggtgggagaaacatttacagactatcgccctcccaaaata
tctattggtcctccccatccggatcctatagtggagacatcgtccttatctgcagtacag
ccacctgaacctacatatgatcttaaaattaaagatgagctggaaagttcaaaagtgttg
tcatgcttgcagatagagacattggtgtatgcatgtcagagacaccttcaacaccttcag
aatggtgcaagggctggatttttcattggtgatggagctggtgtcggaaaaggaagaaca
attgcagggttaatctgggagaattggcaccatgggaggaggaaagcattgtggatttct
gttggttcagacttgaagttcgatgcgagaagagacttagatgacgtcaatgcgatgtgt
attgaagtgcatgctttgaacaagctgccttattcaaagcttgattcaaagtccgtcggt
gtcagggagggagttgtttttatgacatatagcagccttatagcatcttcagagaaaggt
cgttctcgtttgcagcagctcgtgcaatggtgtggaccagaatatgatggtcttctcata
tttgatgagtgtcacaaagccaaaaatttggtacctgaagctggaggtcaaccaacgcga
acaggagaagctgttcttgagattcaggctcgacttccccaagctcgtgttatttattgc
tcagcaactggtgcatcagaaccccgcaatttgggttatatggttcggcttggtctttgg
ggagctggaacgtgtttctctaatttccatgaatttttaggtgctcttgaaaaaggaggt
gttggagcactagaacttgtggccatggacatgaaagcaaggggaatgtatgtatgtcgt
acgcttagctatgaaggggtggagtttgaagtcattgaagcaccattagaggccaaaatg
atggaaatgtatataaaagctgcagagttctgggcagagttgcgggtggaattactatca
gcaagtgcatttctttcgactgagaagcctaattctagtcagctatggcgcttatactgg
gcgaaccatcagcgtttctttagacacatgtgtatgtcagctaaggtgcccgctgttgta
agacttgccacaaaagcattagtggaaaataagtgtgtggtcattggccttcagagtact
ggagaggcacggaccgaggaagctgtgacgaaatatggtcttgaacttgatgattttatt
tcggggcctcgtgagctgttgcttaaatttgttgaagaaaattatcctttacctgaaaaa
cctgaggtccttccaggtgaggaaagtgtcaaggagcttcaacgaaaaaggcatttagca
acacctggtgtttcatttaaaggcagagttaggaaagttgctaagtggagagctgcaagc
gatgctgaaagcgaggacgaatctgaaactgattctggaaatgaatctaccgaatctgat
gatgagtttcagatctgtgagatatgcaattctgaagaggaaagaaagaaattgctcaaa
tgttcctgttgcggtcaactggtacatcctgcttgtttagttccacctgtagtagatgca
gtagctgttgattggtcctgtcattcgtgcaaggaaaaaactgatgaatatctccatgca
aaacaagcctatgtagctgaactgttgaagaggtatgaaggagcaatggagcgcaagttg
aaaattcttgagataattcgttctttagatcttcccaacaatccattggatgacattatt
gatcagcttgggggccctgataaagttgcagaaattacagggaggcgaggcatgcttgtt
agagcctctggtggaaaaggtgttacttatcaggcgcggaacaccaaggatgtgaccatg
gaaatggtcaatatgcatgagaagcagctcttcatggacggtaagaagctggttgctatc
atttctgaagctggatcagctggtgtctctttgcaagcagaccgaagggcagtaaatcag
aaaagaagagtccatttaactctggaattaccttggagtgcagaccgagctattcaacaa
tttggaagaacacatcggtcaaatcaagcttctgcacctgagtataggctactctttact
aatcttgggggtgagcgccgatttgcatccattgttgccaagagattggaatctcttgga
gcattaacgcagggagaccgcagggctggaccatctctgagtgcttacaattatgacagt
gcttatggaaaaagggccctaatggtgatgtatagaggaatcatggagcaggatgctttg
ccagttctacctccaggttgttcatcagataaaccagatactattcaggagtttatgatc
aagggaaaagctgctcttgtttctgttggcatagttagagatacaagttggggaaatggg
aaggactcaggaaagctttctggtcgtatagttgattcagacatgcatgatgttggacgt
ttccttaatcggcttttgggactgccccctgaaatccaaaacaggctctttgagttattt
gttagcatccttgaacttctcattcaaaatgcgcgtgttgaagggcattttgattctggc
attgttgacatgaaagccaacattatcgaacaacaagggactccaaagactgttcatgtc
gatcatttgtctggtgcatccactgtactatttactttcactctggatcgtggtatcaca
tgggagtctgcatctgtcttgcttgaggagaagcaaaaagatggacttggttcacctaat
gatggattctttgaatctaagagggaatggctgggaaggcggcattttcttctagcattt
gaaggttctgcctctgggttgtataagatagtccgtcctgctgtgggggaggcactaagg
gagatgcctctagcagaacttaaaaacaagtacagaagaatttcagaattagagaaagct
cgtagtggctgggaagatgaatacgaggtttcatctaagcagtgcatgcatggccccaag
tgtaagattggtagcttctgtacggttggcagaagactacaggaggtaaatattctgggt
ggtctgattcttcctgtttggggaactattgagagggcccttgctaagcaggcccgccaa
agtcataaacgacttcgagttgtgcgcatagagactacaactgaaaatcagcgcattgtt
gggcttcttatcccaaatgctgcagttgagtccgtacttcaagatttagcttgggttcaa
gatattgatgattga
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