Rhododendron vialii: 131328901
Help
Entry
131328901 CDS
T09330
Name
(RefSeq) cryptochrome-1 isoform X1
KO
K12118
cryptochrome 1
Organism
rvl
Rhododendron vialii
Pathway
rvl04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
131328901
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Cryptochrome_C
Motif
Other DBs
NCBI-GeneID:
131328901
NCBI-ProteinID:
XP_058217849
LinkDB
All DBs
Position
6a:complement(12289268..12297553)
Genome browser
AA seq
684 aa
AA seq
DB search
MSSGGCSIVWFRRDLRVEDNPALAAGVRSGAVVAVFIWAPEEEGHYYPGRVSRWWLKHSL
ALLDSSLRSLGTSLINKRSTDTVSSLLDVVKSTGATQLFFNHLYDPLSLVRDHRAKEVLT
AQGIRVHSFNADLLYEPWEVNDDHGHPFTAFSAFWERCLSMPYDPESPLLPPMRITSGDV
SRCSSDKLVFEDESEKGSNALLARAWSPGWSNADKALTTFLNGPLLEYSKNRRKADSAAT
SFLSPHLHFGEVSVRKIFHLVRIKQVLWANEANKAGEESVNLFLKSIGLREYSRYMNFNH
PYSHERPLLGHLKFFPWVVDEGYFKVWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSS
FFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTLPDGREVDRIDNPQFEGYKFD
PNGEYVRRWLPELARLPTEWIHHPWNAPESVLQAAGIELGSNYPRPIVEIDAAKARLEEA
LSEMWQLEAASRAALENGSDEGLGDSESIPIAFPDDLQMDIDYEPERNNANTVRHYEDQM
VPSMASSVFRVEDEEASLDLQNSAADSRAEVPINLTVNQELRREAVNQGNMQMGRINGTL
PQFNVSTGMRNGEDSTAESSSSSSGRGIVPVWSPSASTYSEQFVGEESGIGTSSSYLQRQ
QQSHQLMNWRRLLLPDWTTKLGGG
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagcggtgggtgtagcatagtgtggtttaggagagatctgagggtagaagataac
ccagcactggcagcaggggtgagatcaggggcagtggttgctgtgttcatatgggcacca
gaagaagaaggtcactattaccccggtagggtatccaggtggtggctaaagcacagtttg
gctctacttgattcctctttgaggagccttggtacctcacttatcaacaagagatccact
gatactgtttcttctctccttgatgttgtcaaatctactggtgcaactcagctcttcttc
aaccacttatatgatcccttgtctcttgttagggatcacagggcaaaggaagttttaact
gcacaaggaatacgagtgcattctttcaacgcagatttgctctacgaaccttgggaagtc
aatgatgaccatggtcacccattcacagctttttcagctttctgggagagatgccttagt
atgccttatgatcctgagtctccactgctcccgcctatgaggataacctcaggtgatgtg
tccagatgctcttcagacaaacttgtatttgaggatgaatcggagaaaggaagcaatgca
cttcttgctcgagcatggtcacctgggtggagcaatgctgacaaggctctaactaccttc
cttaatggacccttacttgagtactcaaagaaccgtagaaaggccgatagtgctgcaacc
tcatttctatctccgcatttacatttcggagaagtaagtgtgcgaaaaattttccatctt
gtccgcattaagcaagtcctatgggcaaacgaagcaaacaaagccggggaggagagtgtc
aatttgtttctcaagtccattggtctgagggaatattcaagatacatgaattttaatcac
ccttacagccacgaaaggcctcttcttggccaccttaagtttttcccttgggtggtggat
gaaggatattttaaggtgtggagacaaggcagaactggttatccattagtggatgctggg
atgagagagctgtgggccactgggtggctacacgatcgtatacgggttgtggtgtctagt
ttctttgtgaaagttctacagcttccatggagatgggggatgaaatatttctgggatact
ttattggatgcagatttggagagtgatgctctgggttggcagtacatatctggcactctc
cccgatggtcgtgaggttgatcgaatagataatccacagtttgagggttacaaatttgac
ccaaacggagagtacgtacggcgttggctacctgaacttgctagacttcccacagaatgg
atacaccacccatggaacgcaccagaatccgtactccaagccgccggaatcgagttaggt
tctaactaccctcgtccaatagtagaaatagatgcagcgaaagcgcggttggaagaagca
ctttctgagatgtggcaactggaagcagcttctagagctgcacttgagaatggatctgat
gaagggcttggagactctgagtcaatcccaattgcatttccagatgacttacaaatggac
attgattatgaacctgagaggaacaatgctaacacagttaggcattatgaggatcagatg
gtcccaagcatggcttcttcagtttttagggttgaagatgaagaagcgtctttggatctc
caaaattctgcagcggatagtagggcagaagttccgataaaccttactgtaaatcaagaa
ctgagaagagaagcggtgaaccaagggaatatgcaaatggggcggattaatgggactctg
ccacaatttaacgtttcaacagggatgcgaaatggtgaggattcaacagcagaatcttcg
agtagtagtagtgggagaggcatagtacccgtatggtctccctcagcttctacttactcg
gagcagtttgtgggtgaagaaagtggtattggaactagttcttcgtacttgcagaggcag
caacagtctcaccaattgatgaactggagacggcttttgcttccagattggacaacgaag
ttgggaggtggataa
DBGET
integrated database retrieval system
