Rhododendron vialii: 131329197
Help
Entry
131329197 CDS
T09330
Name
(RefSeq) 26S rRNA (cytosine-C(5))-methyltransferase NOP2B-like
KO
K14835
25S rRNA (cytosine2870-C5)-methyltransferase [EC:
2.1.1.310
]
Organism
rvl
Rhododendron vialii
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rvl03009
]
131329197
Enzymes [BR:
rvl01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.310 25S rRNA (cytosine2870-C5)-methyltransferase
131329197
Ribosome biogenesis [BR:
rvl03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
131329197
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
Methyltr_RsmF_N
RsmF-B_ferredox
TRM5-TYW2_MTfase
Methyltransf_31
FtsJ
Motif
Other DBs
NCBI-GeneID:
131329197
NCBI-ProteinID:
XP_058218255
LinkDB
All DBs
Position
6a:13495507..13503236
Genome browser
AA seq
657 aa
AA seq
DB search
MAATALSKRKEAKSQKPPLRKKQRNEPPPKKKQKNVSFPAKNPIKDDLISDSDDTDEMVE
EHGQLHEDQQQQGSDSGSEMSSDGDDPLADDFLLGSDDRSGDGEKGSDLDSDSDESDIEV
KARADEEEKVREEEDALEELKLNIKEEPDEFRLLTKEELEEEANRPPDLQSLQRRIKEIV
RVLSNFKSLRQEGATRKDYVEQLTMDLGSYYGYNDFLIGALVEMFPVNELMELIEAFEKP
RPICLRTNTLKARRRDLAGVLLNRGVNLDPLSKWSKVGLVVYDSQVPIGATPEYMAGYYM
LQSASSFLPVMALAPQEKERIVDMAAAPGGKTTYISAIMKNSGIVYANEMKESRLKSLTA
NLQRMGVTNTIVCNYDGRELPKALGQNTVDRVLLDAPCSGTGVISKDESVKTSKTLEDIH
KCAHLQKELLLAAIDMVDANSKSGGYIVYSTCSIMIPENEAVIDYALRKRDVKLVPCGLD
FGRPGFVRFRENRFHPTLEKTRRFYPHVQNMDGFFVAKLKKMSNSKLTPTAPEPSATVEQ
GSEPIDSVDVNSDEGKFQRRSSKESITTESTKITITVSKESDMKKSKESGKLQNGFPEKG
KHMPKFTAKYWKERKQQRLSREEIAKAREEKRQTLREDKKKAEGKKRAAKESGGNVK
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atggctgctactgcattaagcaagagaaaggaagcaaagtcacaaaaacctccacttaga
aagaagcaaaggaatgaacctccacctaaaaagaagcaaaaaaatgtatctttccccgcc
aaaaatccaataaaggatgatcttattagtgattctgatgacacggatgaaatggttgaa
gaacatggccaattgcatgaagaccaacagcaacaaggaagcgattcaggttctgagatg
tcttctgatggggatgatccgttggccgatgattttctcctaggaagtgacgacagaagt
ggagatggagagaaaggttctgatttggattctgattctgatgagtctgatattgaggta
aaggcaagagccgatgaggaagaaaaggtgagagaagaagaagatgcactggaagagttg
aaactgaacattaaagaagaaccggatgaattcagattgctaacaaaggaggaacttgaa
gaagaggcaaatcgccctcctgatctccaaagtcttcaaaggaggataaaagaaattgtt
cgggtgctttcaaatttcaagtctctaaggcaagagggggcaacacgaaaggattatgtc
gagcaacttacaatggatttaggttcatactatggttacaatgatttcctgattggggca
ttggtggagatgtttccagttaacgaacttatggaacttattgaagcttttgagaagcct
cgtccaatatgtctcagaaccaacaccttaaaggctcgcagaagggatttggctggtgtt
ctgttgaacagaggtgtaaacttggatccattaagcaaatggtcaaaagtaggactggtt
gtttatgattcacaagttcctattggtgccacgccagaatatatggccggttattacatg
ttgcaaagcgctagctcattcttgcctgtgatggctcttgctcctcaagagaaggaaagg
atagttgatatggccgctgctcctgggggtaaaacgacctacatttctgctattatgaaa
aacagtggtatagtttatgcaaatgaaatgaaggaatcaagactcaagtcacttactgca
aatttgcagcgaatgggtgtaacaaacaccatagtttgcaactatgatggaagagagctg
cccaaggctttgggtcagaacacagttgatagggttttgttagatgccccatgtagcgga
actggggtcatatctaaagatgagtctgtcaaaacctctaaaaccttggaggacatacac
aagtgtgcccacttgcagaaggagctgctgcttgctgccattgacatggtggatgccaac
tcaaaatctgggggatacattgtttactccacgtgctcaataatgattcctgagaacgaa
gcagtcatagattatgctctcaggaagagggatgtaaaactcgtgccatgtggccttgac
tttggacgccctgggtttgttcgctttagagaaaaccgttttcatcctaccttagagaag
acacgacgtttctatccccatgtacagaacatggatggtttttttgtggctaagttgaag
aaaatgagcaattccaagctgactccaacagctcctgaaccatcagcaacagtagaacaa
ggttccgagccaattgatagcgttgacgttaattctgatgaaggaaaatttcaaaggcgt
tcgagtaaagaaagcattacaacagaaagcacgaaaatcaccataacagtaagtaaagaa
agcgatatgaagaagagtaaagaaagtgggaaattgcagaatggttttccagaaaagggg
aagcacatgcccaaattcactgctaaatattggaaggaaaggaaacaacaacgcctttct
agagaggaaattgcaaaagctagggaggagaagaggcaaactttgagggaagacaagaaa
aaagctgaggggaaaaagagggctgcaaaggagagtggtggaaatgtcaaatga
DBGET
integrated database retrieval system
