Rhododendron vialii: 131329353
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Entry
131329353 CDS
T09330
Name
(RefSeq) cyclic nucleotide-gated ion channel 4
KO
K05391
cyclic nucleotide gated channel, plant
Organism
rvl
Rhododendron vialii
Pathway
rvl04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
131329353
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rvl04040
]
131329353
Ion channels [BR:
rvl04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
131329353
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GFIT
Motif
Pfam:
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
131329353
NCBI-ProteinID:
XP_058218433
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Position
6a:39530071..39538066
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AA seq
666 aa
AA seq
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MASEQEISHGNYHDSDDEEEEEEEEEEEVEEENSEEMKTPRGGRSRGWSVGRVLDPRTTW
VQEWNRVFLLVCATGLFLDPLFFYALSVSDTCMCLFVDGWFAVTVTVLRCMTDALHVWNM
CLQLKMNKLSYAPVGGTGESTRLQTKSARAVALGYLKARKGFFLDLFVILPLPQVVLWVA
IPALLERGSTTAVMTVLLIMFLFQYLPKIYHSVCLLRRMQNLSGYIFGTVWWGIALNMIA
YFVASHAVGACWYLLGIQRAAKCLQKHCRGTKGCGLRMLACEDPIYYGTTSLVRDRTRLL
WGDNKQVRSACLENDDNFDFGAYKWTVQLVTNESRLEKILFPIFWGLMTLSTFGNLESTT
DCLEVVFIIIVLTTGLLLVTMLIGNIKVFLHATTSKKQAMKLKMRNIEWWMRRRHLPPAF
KQRVRNYERQRWAAMRGVDECEMIRNLPEGLRRDIKYHLCLDLVRQVPLFQHMDNLVLEN
ICDRVKSLIFTKGETITREGDPVQRMLFIVRGHLQSSQVLRDGVESCCMLGPGNFSGDEL
LSWCLRRPFVERLPPSSSSLVTVGTTEAFGLESEDVKYVTQHFRYTFVNEKVKRSARYYS
PGWRTWAAVAIQLAWRRYRHRLTLTSLSFIRPRRPLSRCSSLGEDRLRLYTALLTSPKPN
QDDFDF
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atggcaagtgagcaagagatttcacatggtaattaccacgacagcgacgatgaagaagag
gaggaggaggaggaggaggaagaggtggaggaagaaaattcggaggagatgaaaactcca
cgagggggaaggagtaggggatggtcagtgggccgggttttggacccgaggacgacgtgg
gttcaagaatggaaccgggtattcctcctggtgtgcgccacgggcctgttcttggacccg
ctcttcttctacgcgctgtccgtgagcgacacgtgcatgtgcctgttcgtggacgggtgg
ttcgcggtcaccgtcacggtgctccggtgcatgacggacgccctgcacgtgtggaacatg
tgtctccagctcaagatgaacaagctgtcttatgcacccgtgggtggcaccggcgaaagc
acccggttgcaaaccaagagtgctcgagcagttgctcttggctacttgaaggccagaaag
ggtttctttttggatctctttgttatcctacctcttccacaggtagtactatgggtagcc
attccagctctgctggagaggggatcaacaactgcagtgatgacggtgttgttgataatg
tttctcttccagtatctccccaagatttaccactccgtgtgcctcctccgccgcatgcaa
aacctctccggttacatcttcgggactgtttggtgggggatcgccctcaacatgattgct
tactttgttgcatcccatgcagtgggagcatgttggtacttactgggaatccagagggca
gcaaaatgcctacaaaagcattgcagaggaacaaaggggtgtgggctgagaatgttggct
tgtgaagatcccatttactatggaaccacaagcttggtaagagacagaaccagactgctt
tggggggataacaagcaagtaagatctgcctgcctggagaatgacgataactttgatttt
ggagcttataaatggacagttcaacttgtcaccaacgaaagccgattggagaagatcctc
tttcccatcttctggggcctcatgactctcagtacctttgggaatttggagagcacgacg
gattgcctagaggtggtctttattattatagttctaacgactggactccttttggtcacg
atgttgatcggaaatatcaaggtgtttctgcatgcaactacgtcaaagaaacaagcgatg
aaattgaagatgaggaacatagagtggtggatgaggaggagacacttgccaccggcgttc
aagcagagggtgcggaattatgagaggcagcggtgggctgcgatgcgcggagtggacgaa
tgtgagatgatcagaaacctccctgaagggctgaggagagatatcaaataccatctctgc
ttagacttggttagacaggtacctttattccaacatatggataatctagtcctagagaat
atctgcgaccgcgtgaagtccctcatattcacaaagggagaaactataacaagagaggga
gacccagttcagagaatgctgtttatagtgaggggtcatcttcaaagcagccaagtacta
agagacggcgtcgagagttgctgcatgctaggcccgggaaacttcagcggagatgaactt
ctctcgtggtgcctcaggagacctttcgtcgaacggctaccgccttcttcatcctctctg
gtcactgtggggaccacggaggcattcggactagaatccgaggatgtgaaatatgtcact
caacattttaggtacacatttgtgaatgagaaagtgaagaggagcgcaagatactactcc
ccaggatggagaacatgggctgcggtggcgatccagttggcttggaggaggtacaggcac
cgattaacgctcacatcgttgtcgttcattaggcccagaaggcccttgtcgcggtgttct
tcccttggggaagataggctcaggctttatactgcgttattgacttcacccaaacctaat
caagatgattttgatttctga
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