Rhododendron vialii: 131329402
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Entry
131329402 CDS
T09330
Name
(RefSeq) pre-mRNA-splicing factor SLU7-like
KO
K12819
pre-mRNA-processing factor SLU7
Organism
rvl
Rhododendron vialii
Pathway
rvl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
131329402
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rvl03041
]
131329402
Spliceosome [BR:
rvl03041
]
Complex C
Other components
Step II factors
131329402
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Slu7
zf-CCHC_4
Motif
Other DBs
NCBI-GeneID:
131329402
NCBI-ProteinID:
XP_058218485
LinkDB
All DBs
Position
6a:complement(31518914..31525110)
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AA seq
536 aa
AA seq
DB search
MATASVAFKSREDHRKQMELEEARKAGLAPAEVDEDGKEINPHIPQYMSSAPWYLNSERP
SLKHQRKWKSDPNYTKSWYDRGAKIYQADKFRKGACENCGAMTHDLKSCMERPRRVGAKW
TDKNIAPDEKIETFELDYDGKRDRWNGYDAASYAYVIERYEARDESRKKYLKEQQLKKLE
EKNGNESGEDGVSDEDDNEDDLKVDEAKVDESKQMDFAKVEKRVRTTGGGSTGTVRNLRI
REDTAKYLLNLDVNSAHYDPKTRSMREDPLPDMDPNEKFYAGDNQNRVSGQALEFKQLNI
HAWEAFDKGHDVHMQAAPSQAELLYKNFKVNKEKLKSEVKETIMEKYGNAATEEQLPREL
LLGQSEREVEYDRAGRIIKGQELALPRSKYEEDVHINNHTSVWGSWWWDHQWGYKCCKQT
IRNSYCTGAAGIEAAEAATDLMRDNLARKEAAEEMPAQTEEKQLATWGTDIPDDLVLDEK
LLAEALKKEDERKKEQKDERKRKYNVKWNDEVTAEDMEAYRMKKIHHDDPMKEFLH
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atggcgactgcatcagtggcattcaaatctagggaggaccatagaaagcagatggaattg
gaagaagcacgtaaagcaggtcttgctccagccgaggttgatgaagatggaaaagaaatc
aatccccatattccacagtatatgtcatcggcaccttggtatcttaattcagaaagaccg
agtttaaaacatcaaaggaaatggaagtcggatccaaattatacaaaatcatggtatgac
agaggtgcaaaaatttatcaggctgacaagttcaggaagggtgcttgcgaaaactgtgga
gccatgacacacgatttgaagtcatgcatggaaaggccacgtagagtgggagctaaatgg
acggacaaaaatattgcgccggatgagaaaatagagaccttcgagttggattatgatggc
aagcgggaccgttggaatggctatgatgccgctagctatgcctatgttattgagagatac
gaagcaagggatgaatccagaaagaaatacttgaaagagcaacagcttaagaaattagag
gagaaaaacggtaacgaaagtggagaggatggggttagtgatgaggacgacaatgaagat
gatctgaaggtggatgaagccaaggttgatgagagcaaacagatggactttgcaaaggtt
gagaagcgtgtgcgtactactggtggtgggagtacaggaactgtcaggaacctgcgtatc
cgagaggacacggcgaaataccttcttaatcttgacgttaactctgcccactacgatcca
aaaacccgatccatgcgtgaggatcctcttccagatatggatcccaacgagaaattttat
gcaggggataatcaaaatagagtaagtggtcaagctttggaattcaagcagctcaacatt
catgcttgggaggcatttgacaaggggcatgatgttcacatgcaagcagctccgtcccaa
gcagagttgctttataagaattttaaggtcaataaggaaaagctgaaatcagaagtgaag
gagaccattatggagaagtatggcaatgctgctacagaagaacaacttccaagggagctt
ttactgggacaaagtgagagagaggttgagtatgatcgtgctggcaggattataaagggc
caggagctagcccttcctaggagtaagtatgaggaagatgttcatatcaacaaccacact
agtgtttggggttcgtggtggtgggatcatcaatggggttacaagtgttgcaaacagact
atccgaaacagctattgtacgggtgctgctggtattgaagcagctgaagctgcaacagat
ctaatgagggataatcttgctcgtaaagaggctgcagaagagatgcctgcacagacagag
gagaagcaacttgctacttggggaactgatataccggatgatttggttcttgatgagaag
ttactagctgaagcactaaagaaggaggatgaaagaaagaaagaacagaaagatgaaaga
aagcgcaagtacaatgtcaaatggaatgatgaggttactgctgaggatatggaggcatac
aggatgaagaaaatccatcacgatgatccaatgaaggaattcctgcactaa
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