Rhododendron vialii: 131329425
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Entry
131329425 CDS
T09330
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1-like
KO
K14411
RNA-binding protein Musashi
Organism
rvl
Rhododendron vialii
Pathway
rvl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
131329425
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rvl03019
]
131329425
Messenger RNA biogenesis [BR:
rvl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
131329425
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
131329425
NCBI-ProteinID:
XP_058218509
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Position
6a:complement(34977910..34983643)
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AA seq
473 aa
AA seq
DB search
MQSDLGKLFIGGISWDTDEERLKDYFSGYGEVLEAVIMKDRSTGRARGFGFVVFADPAVA
ERVIKEKHIVDGRMVEAKKAVPRDDQSTVSRSSSSIQGSPGPGRTRKIFVGGLASTVTET
DFKMYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKVLLKTFHELNGKMVEVKR
AVPKEMSPGPTRSPLGGYNYGLTRNNFLNGYGQGYSPSTVGAYGLRMDSRFSPITSGRSG
FAPFGTGYGMGLNFEPGVNPNFGGSANLNGALSYGPGLNPYFIGNSNRSGNPVGYDGGNG
GNTSFFSSGTRNFWENGGINYGTSSPRSSAYAGGRGSIGGTFANTGINWGSSPLSPQGGG
NAASGNIGYGGGDNNYSLAGGGYGRNTATSGPLSSSHAATNYGYDGAFADFYGGGSVYGD
PPTWRSTNSEREGSSSFGYGIGNGASDLPGDNTPGYIGGYSVTKRQTNRGIAG
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgcaatcggatcttggaaaattattcattggtggaatctcttgggacacagacgaagag
cgtttgaaggactattttagtggttatggggaagttttggaagcagtaattatgaaggat
cggagcacagggcgtgcccgtggttttggttttgttgtctttgctgaccctgcagttgca
gagagagtcattaaggagaaacacatcgttgatggtcggatggttgaggcaaagaaggct
gttccaagggatgatcagagtacagtgagtagaagcagtagtagcattcagggttcgcct
ggtccagggcgcacaaggaagatttttgtgggaggtttagcttccacagtcacagagact
gacttcaagatgtattttgagcagtttgggaccatcacggatgtagtggtgatgtacgat
cacaacactcagagaccaagaggctttggattcatcacctatgattcggaggacgctgta
gacaaagtgttgctcaaaaccttccatgagctaaacggaaaaatggttgaggtcaagcgt
gcggtccccaaagaaatgtcaccaggtcctacccgtagcccacttggtggatataactac
ggtttgactaggaataacttcctcaatggctacggtcaagggtactctccaagtacagtt
ggtgcctatggtcttagaatggatagcagattcagtccgatcaccagtggtcgaagtggg
tttgctccatttggtaccggttatggaatgggtttgaattttgaaccgggggtgaaccca
aattttgggggaagtgcgaacctcaatggtgcattaagctatgggccggggttgaacccc
tattttattggtaattcaaatagatccggcaatccagttgggtatgatggtgggaacgga
ggaaacacttctttttttagctcagggactcggaatttttgggagaatggagggattaat
tatggaacaagctcaccacgttcaagcgcctatgcgggtggaaggggaagcattggagga
acctttgccaatactggaattaattggggttcttctccgctttcaccccagggcggaggt
aatgctgctagtgggaatattggttatgggggtggcgataacaactatagtttggccggg
ggagggtatggaagaaatactgcaactagtgggcccctctcatcatcgcatgctgcaaca
aattatggatatgatggggcttttgcagacttctatggtggcggctcggtttatggggac
cctcctacttggcgttcaacaaactctgaaagagagggatccagttcttttggttatggg
attggcaatggagcctctgatcttcccggagataatactcctggttatattggtggttat
agcgttactaagagacagactaatagaggtattgctggctag
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