Rhododendron vialii: 131329677
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Entry
131329677 CDS
T09330
Name
(RefSeq) septin and tuftelin-interacting protein 1 homolog 1
KO
K13103
tuftelin-interacting protein 11
Organism
rvl
Rhododendron vialii
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rvl03041
]
131329677
Spliceosome [BR:
rvl03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
131329677
Other components
Complex C specific factors
131329677
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Motif
Pfam:
GCFC
TIP_N
G-patch
G-patch_2
Motif
Other DBs
NCBI-GeneID:
131329677
NCBI-ProteinID:
XP_058218959
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Position
6a:complement(42489037..42492154)
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AA seq
846 aa
AA seq
DB search
MGDHEESERFGMENDFEDGQWIGGEFYYRKRKDKPRQTKDDALFGVFADDSDDSEDDSSS
ARKRKKHLSKKSDLTKPVNFVSTGTVMPNQEIDRHSKEEDTVENQNGLGTSSGGLGFHSG
SSSSLKKSETDDNADIHFDDSDKDFLPTAFGRRIKEGAQQRREREREKSKLANSSQSVRR
ETDSGDVGAFEKHTKGIGMKLLEKMGYKGGGLGKNEQGIVAPIEAKLRPKSMGMGYDNFK
ESSLPALQLPEKEKSLLGVSQPASRTYEKLWSKQAQPKKHKKKDYVTAEELLARKQEQGL
EVVQKVFDMRGPQVRVLTNLENLNAEEKARENNIPMPELQHNLRLVVDLAELDIQKIDQD
LRNERETLVTLQKEKEKLQYETTHQKKQLDNMLEIVSSLDQIGEENLLGTLTLDSLAKSF
REMQRRYADDYKLCNLSCIACSFALPLFIRVFQGWDPLQNPSHGLNVISLWKNLLQGEDD
CFDFSDAASPYTQLFMEVVFPAVRISGTNTWQVRDPEPMLRFLESWEKLLPSSVLQTILD
NIVMPKLSAAVDSWDPRRETIPIHAWVHPWLPLLGQKLEIFYHTVRNRLEGVLHAWHPSD
MSAYYILSPWKTVFDPASWEQLMVRFILPKLLAVMHEFQVNPANQKLDQFYWIQTWATSI
PIHHMIHLMDVFFDKWQQVLYHWLCSNPNFEEVTKWYLGWKELLPPELLANEHVRYRLNL
GLDMMNQAVEGTEVVQPGLRENISYLRVLEQRKFEAQKKVAAHARASGSLDGATQMTLKE
VIEDYAQQNGFLFKPKPGRMQDGHQIYGFGKISIIIDSLNQKVFAQMEEKWSLVSLEQLL
EMQSSG
NT seq
2541 nt
NT seq
+upstream
nt +downstream
nt
atgggggatcatgaggagtcagagcggtttgggatggagaacgatttcgaagacggtcag
tggatcggtggggagttctactaccgtaagcggaaggacaagcctcgccagaccaaagac
gacgccctttttggcgtcttcgctgatgacagtgatgattccgaggatgattcttcatct
gccaggaagcgtaagaaacatctctcaaagaagtctgaccttaccaagcccgtcaatttc
gtctctactggcactgtcatgcctaaccaagagatcgatcgccattccaaggaagaggat
acagtggaaaatcaaaatggccttggaacttcttccggcggcctagggtttcattcgggc
tcctcttcttctttaaagaagagcgaaacagacgacaatgctgacattcattttgatgac
agcgacaaagacttcctgcccactgcttttggcaggaggatcaaggaaggcgcgcagcag
cggcgcgagagggaaagagagaagtcaaaattagccaactcctcacaatctgtgaggcgg
gaaacggattctggagatgtaggtgcgtttgaaaagcacacgaaaggcattgggatgaag
ttgcttgagaagatgggatacaaaggaggtgggcttgggaaaaacgagcaggggattgtc
gctcccatcgaggcgaagctgcggcccaaatcaatgggaatgggttacgataattttaaa
gagtcaagtttgccggcgttgcaattaccagagaaggagaaatctttgcttggagtatct
cagcctgcaagtcgtacctatgagaagctgtggtcgaagcaagctcagccaaagaagcat
aagaagaaggattacgttaccgccgaggagttgttggccaggaagcaagagcaggggctg
gaggttgttcaaaaagtttttgacatgagagggccacaggttcgagtcttgacaaacttg
gagaacttgaatgcggaggagaaagcgagggaaaacaacattcctatgccggagctgcag
cacaatttgagattggttgttgatttagctgagctggacatacagaaaattgatcaggat
ttgaggaatgagagggagacgttggtcactttgcagaaggagaaggagaagcttcagtat
gagacaactcaccagaagaaacagctggacaatatgctggaaatagttagctcattggac
caaattggggaggagaacttgcttggaactttgactcttgactccctcgcaaagtcattt
agggaaatgcagaggcggtatgctgatgattataaactctgtaacttgtcttgcattgca
tgctcatttgcccttcctctgttcattagagtgtttcaaggatgggatccgcttcaaaat
ccatcacatgggttgaatgtgatatccttgtggaagaatctgttgcaaggagaggatgat
tgctttgatttttctgatgcagcgtcaccttatactcagttgtttatggaagttgtcttc
cctgctgtgaggatatctggcaccaacacttggcaggtgagagatcctgaaccaatgctc
cggtttttggagtcttgggaaaagctgctgccttcttcagttcttcaaactatattggat
aacattgttatgcctaaactatcagctgctgtggattcctgggacccacgtcgggaaact
attccaatccacgcgtgggtgcatccatggctaccgttattgggacaaaaactggagatc
ttctatcatactgtacgcaataggttggaaggtgttcttcatgcttggcaccctagtgat
atgtctgcatactatatattgtcgccttggaagactgtgtttgatccagctagttgggaa
caactaatggttcgatttattctgccgaaattgttggctgtcatgcatgagttccaagtg
aacccagcaaaccagaagcttgaccagttctactggatccagacttgggctacttctatt
cccattcatcatatgatccacttaatggatgtgttctttgacaagtggcaacaagttttg
tatcattggttgtgctcaaacccaaactttgaagaagtgaccaaatggtatttgggttgg
aaggagctgctcccaccagaacttctggcgaatgaacatgttaggtatcgacttaacttg
ggtcttgacatgatgaaccaggcagttgaaggcacggaagtagtccaacctggtttgagg
gaaaacattagctatctcagagtgcttgagcaaagaaagtttgaggctcagaagaaagta
gcagcacatgctcgagcttctgggagcctggatggtgcaacccagatgaccttgaaagaa
gttatcgaagattatgcacagcagaatgggtttctatttaagcctaaacctgggagaatg
caagatggtcatcagatatatggctttggtaaaataagcattataattgactctctaaat
caaaaggtatttgcacaaatggaagaaaagtggtctttggtttcccttgaacagctgctg
gagatgcaaagctctggttga
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