Rhododendron vialii: 131329746
Help
Entry
131329746 CDS
T09330
Name
(RefSeq) THO complex subunit 3-like isoform X1
KO
K12880
THO complex subunit 3
Organism
rvl
Rhododendron vialii
Pathway
rvl03013
Nucleocytoplasmic transport
rvl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
131329746
09122 Translation
03013 Nucleocytoplasmic transport
131329746
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rvl03019
]
131329746
03041 Spliceosome [BR:
rvl03041
]
131329746
Messenger RNA biogenesis [BR:
rvl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
131329746
Spliceosome [BR:
rvl03041
]
Complex C
Other components
EJC/TREX
131329746
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
131329746
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_IFT122_1st
Beta-prop_WDR5
WD40_Prp19
WD40_WDHD1_1st
WD40
WD40_CDC20-Fz
Beta-prop_WDR3_1st
Beta-prop_EML_2
EIF3I
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
WD40_Gbeta
WDR55
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR19_1st
Beta-prop_TEP1_2nd
Beta-prop_Aladin
Beta-prop_RIG_2nd
Beta-prop_NOL10_N
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_Vps41
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_C
eIF2A
Beta-prop_WDR35_TULP_N
Beta-prop_HPS5
Beta-prop_EML
Beta-prop_DCAF12
DSE1_N
Beta-prop_EIPR1
Beta-prop_NUP159_NUP214
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
TRM82_WD
NBCH_WD40
Tricorn_2nd
WDR90_beta-prop_4th
B-prop_COPA_B_2nd
WD40_RFWD3
Beta-prop_WDR41
PAC11
CFAP251_N
Beta-prop_IFT80_2nd
Beta-prop_ACSF4
TP_0598_N
Beta-prop_WDR11_1st
WD_LRWD1
Beta-prop_Nup120_160
PSI
Beta-prop_SCAP
Motif
Other DBs
NCBI-GeneID:
131329746
NCBI-ProteinID:
XP_058219082
LinkDB
All DBs
Position
6a:complement(42721466..42725637)
Genome browser
AA seq
313 aa
AA seq
DB search
MDKTAPFKNLDSREYQGHKKKVHSVAWNCSGTKVASGSADQTARIWHIEPHGHGKVKDIE
LKGHNDSVDQLCWDPKHSDLIATASGDKTVCLWDARSGKCTQQAELSDENINITYKPDGT
HIAVGNRDDELTILDVRKFKAIHKQKFSYEVNEMAWSMTGDRLFLTTGNGTVEVLAYPSL
QPLDTLVAHTASCYCIAIDPLGRYFAVGSADSLVSLWDISQMLCVRTFTKLEWPVRTVSF
NYTGEFIASASEDSFTDISNVQTGRSVHQIPCRAATNSVEWNPKYNLLAYAGDDKNKYQA
DEGVFRIFGFESA
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atggataaaaccgcgcccttcaaaaaccttgacagcagagaataccaaggtcacaagaag
aaggtgcattcggttgcttggaattgcagtggcacgaaggttgcatccggttctgctgat
caaacagctcgaatttggcatatcgagcctcatggacatggtaaggttaaagacattgaa
ctgaaggggcacaatgacagcgtggatcagttatgctgggacccgaaacattctgactta
atagcaactgcatcgggtgacaagactgtttgtctgtgggatgcccgtagtggaaaatgc
acacagcaagctgaacttagtgatgaaaacattaacatcacctacaagcctgacggtaca
cacattgctgttgggaacagggatgatgaactaacaatattggacgtgcgcaaatttaag
gctatccataagcagaaattcagttatgaggtaaatgagatggcatggagcatgacaggc
gataggttatttttgacaacagggaatggcactgttgaagtactagcatatccatctctt
caaccacttgatacccttgtggctcatacagctagttgctattgcattgcaattgatcca
ttaggaagatattttgctgttggaagtgctgattcgttggtcagcctttgggatatctca
cagatgctctgcgtacgaacattcacaaaactcgagtggccagtcaggacagtaagcttc
aactacactggagaatttattgcttctgccagtgaagactcattcactgatatatccaat
gttcaaactggacgatcagtccaccaaattccctgccgggctgccacgaacagtgtggaa
tggaatcccaaatacaatctgcttgcatatgcgggagatgataaaaacaagtaccaggct
gatgaaggtgttttccgaatatttggctttgagagtgcatag
DBGET
integrated database retrieval system
