Rhododendron vialii: 131329850
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Entry
131329850 CDS
T09330
Name
(RefSeq) lariat debranching enzyme
KO
K18328
lariat debranching enzyme [EC:3.1.-.-]
Organism
rvl
Rhododendron vialii
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rvl03041
]
131329850
03009 Ribosome biogenesis [BR:
rvl03009
]
131329850
Spliceosome [BR:
rvl03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
131329850
Ribosome biogenesis [BR:
rvl03009
]
Eukaryotic type
90S particles
RNase
131329850
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DBR1
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-GeneID:
131329850
NCBI-ProteinID:
XP_058219228
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All DBs
Position
6a:complement(9521633..9529853)
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AA seq
409 aa
AA seq
DB search
MKIAVEGCMHGDLDNVYATLLHLQEVEKTKIDLLICCGDFQAVRNEKDLESLNVKPKFRS
MNSFWKYYLGEKVAPFPTIFIGGNHEASNYLWELYYGGWTAPDIYFLGFAGVVKFGNIRI
GGLSGIYKAHDYHLGHHERVPYNEKDIRSIYHVREYDVHKLMQVEEPIDIFLSHDWPIGI
TDHGDWKTLVRHKPFFNQEIQERTLGSKPAAELLEKLKPPYWFSAHLHCKFAALVQHGEG
GAVTKFLALDKCLPGRKFLQIFEIESEPGPFEIQYDEEWLAITRKFNSILPLTTRRSNFG
SLQLDMQECRQWVSHKLQTRGAKPFEFVQTVPCHNPSGSVSNVSSMGYFRNPQTEAFLQF
LELPYLLDNTSESREQTNSQASFISRGVSFDHDSDVDEIELSEVDDADE
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atgaagattgcagtggaagggtgtatgcatggagatttggacaacgtgtacgcgacgctt
ttgcatttgcaggaagtagagaagaccaaaatcgacctcctcatttgctgtggtgacttc
caggctgttaggaatgagaaggatttggaaagcttaaacgtgaagcctaaatttcgtagc
atgaactctttctggaagtactacttaggggaaaaagtagctccgtttcctaccatattc
ataggcggcaatcacgaagcatcgaattacctgtgggaactatactatggaggatggaca
gcgcctgatatatacttcttgggttttgctggagtggtcaagtttggcaacattcgtatt
ggaggactatctgggatttataaagcacacgattatcatttaggacatcacgagagggtg
ccttataacgagaaggatatccggtctatatatcatgtacgtgagtatgatgtccacaag
ctcatgcaagttgaggaaccaattgatatattcctttcacatgactggcctattggtatc
actgaccacggagattggaagacgcttgttcgacataaaccgtttttcaaccaagagata
caggagagaaccctgggaagtaaacctgctgcagaattgctagaaaaattgaaaccacct
tattggttttcagcacatctacactgcaaatttgctgctttagttcaacatggagaggga
ggcgcggtgacaaaatttcttgcacttgataagtgcctcccaggacgcaaatttttgcag
atttttgaaattgaatccgagccaggaccttttgagatccagtatgatgaagaatggctt
gcaataacgaggaagtttaactctatccttcctctaaccactagaagatcaaattttggg
agtttacagcttgacatgcaagaatgtcgccaatgggttagccataagctacagacaaga
ggggctaaaccttttgagtttgtgcagacagttccgtgccacaatccctctggttctgtt
tcaaatgtttcttctatgggatattttagaaaccctcaaacagaagctttcttacagttt
ctagaacttccttatcttcttgataacacatcggaatcaagggagcaaaccaatagtcag
gcttcctttatttctagaggtgtttcctttgatcatgacagcgatgtggacgaaatagaa
ctttctgaagttgatgatgcagatgagtag
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