KEGG   Rhododendron vialii: 131330126
Entry
131330126         CDS       T09330                                 
Name
(RefSeq) histone deacetylase 9 isoform X1
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
rvl  Rhododendron vialii
Pathway
rvl03082  ATP-dependent chromatin remodeling
rvl03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:rvl00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    131330126
   03083 Polycomb repressive complex
    131330126
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:rvl03036]
    131330126
Enzymes [BR:rvl01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     131330126
Chromosome and associated proteins [BR:rvl03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     131330126
   HDAC complexes
    Sin3A-HDAC complex
     131330126
    BRAF-HDAC complex
     131330126
    REST complex
     131330126
    SHIP complex
     131330126
    MiDAC complex
     131330126
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     131330126
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    131330126
  Chromatin remodeling factors
   NuRD complex
    131330126
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 131330126
NCBI-ProteinID: XP_058219628
LinkDB
Position
1a:complement(39371815..39386516)
AA seq 430 aa
MRSKEKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYELHKKMEIYRPHKAYPAEL
AQFHSADYVEFLHRITPDTQLLFPNELAKYNLGEDCPVFENLFEFCQIYAGGTIDAARRL
NNGICDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVE
EAFYFTDRVMTVSFHKYGDLFFPGTGDVKEIGEKEGKFYAINVPLKDGIDDASFNRLFKT
IIAKVVETYLPGVIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGY
TKENVARCWTVETGVLLDTDLPNEIPENDYSKYFAPENTLKIPSGYIENLNTKSYISTIK
MQVLENLRCIQHAPSVQMQEVPPDFYIPDFDEDEQNPDERVDQHTQDKQIQRDDEYYEGD
NDIDHTMDDV
NT seq 1293 nt   +upstreamnt  +downstreamnt
atgcgctctaaggaaaagatctcctacttctacgacggggatgttggaagtgtatacttt
gggccgaatcatccaatgaaaccacatcggctttgtatgactcaccaccttgttctatct
tatgagcttcacaagaagatggaaatctataggcctcacaaggcgtatcctgctgagctt
gcacagtttcattcggcagactatgtggagttcttgcaccggattacacctgatactcaa
ctcttattccctaatgaattggcaaaatataatcttggagaagattgtccagtctttgaa
aacttgtttgagttctgtcagatttatgctggtggcacaatagatgctgcacgcagattg
aacaatgggatttgtgacatagccattaattgggctggtggattacatcatgctaagaag
tgtgaggcatctggattttgttacatcaatgacttggttttggggattttggaactacta
aaatatcatgctcgagtcctgtacattgatatagatgtacatcatggtgatggtgttgaa
gaagcattctactttacggacagggtgatgactgttagttttcacaagtatggagatctg
ttcttccctggaactggtgatgttaaggaaataggagaaaaagaaggaaaattttacgcc
ataaatgtcccactgaaggatggaatagatgatgccagctttaatcggcttttcaaaacg
attatcgccaaggttgttgaaacgtacttgccaggagtcatagttctccaatgtggggca
gattcgcttgctggtgaccgcttgggatgcttcaacctctccattgatggccatgctgag
tgtgtcaggtttgtcaagaaattcaacttgcccttactggtaacaggaggtgggggttac
acgaaagagaatgtcgccagatgttggactgttgaaactggagttcttctggatactgat
cttccaaatgagatcccagagaatgactacagcaaatattttgcaccagagaatacactg
aagattccgagtgggtacatagagaacttaaataccaagtcatatattagtacgatcaaa
atgcaagttttggagaatcttcgatgcattcaacatgctcccagtgtacagatgcaagag
gttccacctgacttctacattccagattttgatgaagacgagcagaacccagacgagcgt
gtagatcagcacacacaagacaaacaaatccagcgcgacgatgaatattatgaaggcgac
aatgacattgatcatactatggatgatgtgtaa

DBGET integrated database retrieval system