Rhododendron vialii: 131330224
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Entry
131330224 CDS
T09330
Name
(RefSeq) SEC12-like protein 2 isoform X1
KO
K14003
prolactin regulatory element-binding protein
Organism
rvl
Rhododendron vialii
Pathway
rvl04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
131330224
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rvl04131
]
131330224
Membrane trafficking [BR:
rvl04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
131330224
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_EML_2
Beta-prop_WDR5
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40_WDHD1_1st
WD40_CDC20-Fz
WD40
WD40_Prp19
Beta-prop_WDR36-Utp21_2nd
ANAPC4_WD40
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR3_2nd
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_EML
WD40_MABP1-WDR62_1st
Beta-prop_IFT140_1st
Tricorn_2nd
Beta-prop_WDR19_1st
Beta-prop_VPS8
Beta-prop_RIG_2nd
Beta-prop_Aladin
Beta-prop_Vps41
Nbas_N
Beta-prop_CAF1B_HIR1
PEP5_VPS11_N
Beta-prop_HPS5
WD40_Gbeta
Beta-prop_NUP159_NUP214
Beta-prop_RIG_1st
Motif
Other DBs
NCBI-GeneID:
131330224
NCBI-ProteinID:
XP_058219708
LinkDB
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Position
6a:43452935..43459083
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AA seq
390 aa
AA seq
DB search
MADADANCKKYGVPFYGASWVPPTAIRSEPNPTPLPPPEQGDESSGDGSPSISDDYSLVL
FAGGGGEGRSGIPNALLLARFDFASNSLSDHPVARLGTGTDLPYRMAVHPGGDGVICSLP
NNCRYFEWETVSTDVLELGLILSDRVIDELEDVGQQLALKFNYDGSVLALGGEDGKLRVF
KWPSMEIILDEANSHASVKDLDFSPDGKFLVSVGSGGPGRVWDVTSSKLVASLPKEQDEV
FGFCRFSRSDKNPVLYITSMRGQGGSIVRWETSSWKRVSTKQVVRDPVCAFNVSADGKLL
AVGTIQGDVLIINSANMHVQNVVRKAHLGLVTALMFSEDSRALVSASLDSSARVTVIKDA
KKNGFSLWIVILVILLAIAGYYVKTEGILP
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atggctgacgctgatgcgaactgcaagaagtacggcgtcccattctacggagcgtcctgg
gtcccccccaccgccatcagatctgaacccaaccccacaccactaccacctcccgaacaa
ggagatgaatcctctggagacggatctccctcgatctcggacgattactctctggtacta
tttgccggaggcggcggcgaaggtcgcagcggcatccccaacgccctcctcctcgcccgc
ttcgatttcgcctccaattccctctccgatcaccctgtggcaaggcttggaactggtact
gatttgccttacagaatggctgtccaccctggaggagacggtgttatctgttccttgcca
aataattgcagatacttcgaatgggaaacagtgagcactgatgttctggaactgggccta
atactgtcggacagagtcatcgatgaactggaagacgtagggcaacaattggcgttgaaa
tttaactatgatggttctgttcttgctctaggaggcgaggatggaaagttgagggttttc
aagtggcctagcatggaaattattcttgatgaagctaattctcatgcctctgtgaaggat
ttagatttcagccctgatggcaagtttctggtgtcagtaggaagtggtggccctggtagg
gtttgggatgtaacatcttcgaagctggtagcttctttgccaaaggaacaagatgaggtt
tttggcttctgcaggttttcacgtagtgacaagaatccagttctctatattacttcaatg
cgaggtcaaggtggaagtattgtcagatgggagacttcttcgtggaagagagtgagcaca
aagcaagttgttcgagacccagtttgcgcatttaatgtttcagctgatggaaagctcctt
gcagtaggaacaattcaaggtgatgttttgattataaattctgccaatatgcacgtccag
aatgtggttaggaaagcacacctcggccttgtaactgctttgatgttctccgaagattca
agggctttggtctctgcatccttggattcaagtgcaagggtgactgtaatcaaggatgcc
aagaaaaatggattcagcttgtggatagttatactcgtcattttgcttgcaatagctggg
tattatgtgaagacagaaggtattctcccttag
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