Rhododendron vialii: 131330465
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Entry
131330465 CDS
T09330
Name
(RefSeq) DNA polymerase I A, chloroplastic/mitochondrial-like
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
rvl
Rhododendron vialii
Pathway
rvl03030
DNA replication
rvl03410
Base excision repair
rvl03420
Nucleotide excision repair
rvl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
131330465
03410 Base excision repair
131330465
03420 Nucleotide excision repair
131330465
03440 Homologous recombination
131330465
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rvl03032
]
131330465
03400 DNA repair and recombination proteins [BR:
rvl03400
]
131330465
Enzymes [BR:
rvl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
131330465
DNA replication proteins [BR:
rvl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
131330465
DNA repair and recombination proteins [BR:
rvl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
131330465
NER (nucleotide excision repair)
GGR (global genome repair) factors
131330465
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
DNA_pol_A_exo1
Motif
Other DBs
NCBI-GeneID:
131330465
NCBI-ProteinID:
XP_058220038
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All DBs
Position
6a:complement(40911492..40921604)
Genome browser
AA seq
1140 aa
AA seq
DB search
MALGGISTQTSHHCKHYPPLFWLSTSRPGPSSMGSHSSFSLWVASRKALYRDCSCRLPIA
NGTFSSISGFSSSLKVKQSSSCNIMSSSGKYRHYPTDSSWKLEVLSGAGNPCARMVPNLS
GYITSDREPVSCSPQLTKEENDIMSSSGEYRHYPMDSSWKLEVLSGAGNSCVRMVPNLSG
HITSDREPDPQLMEQENKQILEDKAARLWIEEADRLVKEKYELRDSNTPVFVHSNYNPVG
FGIPRVEATANSGQYGLTDMQDGSDHLLSKDLMEASMVSGNSSREGALRSSLGQGYMHSQ
AHTSGACSVKNEGNTSLIEKGPIVQSEGIEYNGSGGLSKEREEKTSKPLSGSSIDKPEGF
DQFHVRERLVRIYEKVLVVDNISMARETVRMLTNQYRHRVYACDTEVAKIDVKQETPVDH
GEMICFSIYSGPEVNFGNGKSCIWVDLLAECGKTILAEFAPFFEDTSIKKVWHNYSFDNH
IIENYGFKVSGFHADTMHMARLWDSSRQTEGGYSLEALSGDPRVCHDENLIGKVSMKTIF
GRGKVKKDGSNGKIITIPPVEELQREDRKLWICYSALDSISTLNLYESLKRKLSGMEWKV
DGCIEGTMLDFYEKYWQPFGELLVTMETEGMLVDRAYLAEVEKVARAEQQVAANRFRNWA
SKYCPDAKYMNVGSDTQLRLLLFGGTLNSKDQNESLPLEKDFKVPNIEKVIEEGKKTPTK
FRNIKLCRLESKLEPEMYTASGWPSVCGDALKTLAGKVSAEFDFTDEAQVLETKEGVSED
KESAYGTAYAAFGGGLKGKEACHAIAALCEVCSIDSLISNFILPLQGSHISGKNGRIHGS
LNINTETGRLSARRPSLQNQPALEKDRYKIRQAFVAAPGNSLIVADYGQLELRILAHLAN
CKSMLDAFKAGGDFHSRTAMNMYPHICEAVEQKSVLLEWHPQPGEDKPPVPLLKDAFASE
RRKAKMLNFSIAYGKTPVGLSRDWKVSVKEAKETVARWYNERKEVRNWQDERKKEACSKK
RCVHTLLGRARLFPSVDRVTSSQRGHIERAAINTPVQGSAADVAMCAMLEILKNLRLKEL
GWRLLLQVHDEVILEGPTESAEEAKAIVVECMSKPFDGKNILRVDLSVDAKCAQNWYSAK
NT seq
3423 nt
NT seq
+upstream
nt +downstream
nt
atggcattaggagggatttccactcaaaccagccaccactgtaaacactatccccctctg
ttctggttatccacttcacgtcctgggccttcttccatgggttctcattcttctttctcc
ctttgggttgcctcaagaaaagccctctacagggactgcagttgcagactccccattgcc
aatggaacattttctagtattagtggttttagtagttcccttaaggttaaacaaagttca
agttgtaacatcatgtcatctagtgggaagtataggcattatcctacggacagctcttgg
aagcttgaagtactttcaggggcagggaatccttgtgctcggatggttcctaacctttca
ggttacattacttctgacagagaacccgtctcttgtagcccacaactgacaaaggaagaa
aatgacatcatgtcatctagtggggagtataggcattatcctatggacagctcttggaag
cttgaagtactttcaggggcagggaattcttgcgttcggatggttcctaacctttcaggt
cacattacttctgacagagaacccgacccacaactgatggagcaagaaaacaaacaaatt
ctagaagataaggcagccagactgtggattgaagaagcagatagactagtgaaagaaaaa
tatgaactaagggacagcaacacaccagtttttgttcatagcaattataatcctgtgggt
tttggaattccacgtgtagaagctactgcaaacagtgggcagtatggccttacagatatg
caggatggcagtgaccatttgctttctaaagaccttatggaggcctctatggttagtggc
aatagcagcagagaaggggctttaagaagctcattgggccaagggtacatgcatagtcaa
gcccatacatcaggtgcatgtagtgtgaagaacgaaggaaacacaagcttgatcgagaag
ggtcctattgttcaatctgaaggtattgagtataatgggtcaggagggctatcaaaggaa
agggaggaaaaaacttccaaaccccttagtggcagctccattgataaaccagaaggtttt
gaccagttccatgtccgcgagaggcttgttcgtatttatgagaaggttcttgtggttgat
aatatctccatggcaagggagactgtcaggatgcttacaaaccaatacaggcatcgtgtt
tatgcatgtgatacagaggtggccaagattgatgtgaagcaggaaactcctgttgatcat
ggagaaatgatatgcttcagcatttattctggaccagaagtaaattttggtaatggcaaa
tcttgcatatgggtagatcttcttgctgagtgtggcaagactattttagccgaatttgct
ccattttttgaagatacctccattaaaaaggtttggcacaactatagctttgataaccac
attatagaaaactatgggtttaaagtttccggttttcatgccgacacaatgcatatggct
cggttgtgggattcttccagacaaacggagggtgggtattctctagaagcgctttcaggt
gacccaagggtgtgccatgatgagaatttgataggtaaagtatcaatgaaaaccattttt
ggcaggggaaaggtgaagaaagatggctctaatggcaaaattataaccatccctcctgtt
gaagagcttcaaagagaagaccgtaaattatggatttgttattctgccttagattcaata
agcacgctaaatctctacgagagcttgaaaagaaaactatcggggatggaatggaaagtt
gatggatgcatagaaggaacaatgcttgatttttatgagaaatactggcagccatttggt
gagcttcttgtgacaatggaaactgaagggatgctggttgatcgagcctatcttgctgag
gtagagaaagtggctagagcagagcagcaggttgctgctaatagatttcgcaactgggca
tcaaagtactgccctgatgctaagtacatgaatgtgggaagcgatacacagttgcgcctg
ctcctttttggcggaaccttgaacagtaaggatcaaaacgagagccttcccttggagaag
gattttaaggttcctaacattgagaaagtgattgaagaaggcaagaagactcccacaaaa
tttcgcaatattaagctgtgcagacttgaatcgaaattagaacctgagatgtacactgca
agtggatggccctctgtttgtggagatgctttgaagacccttgctgggaaggtttctgct
gaatttgacttcacagatgaagcacaggtattggagacgaaggaaggagtaagtgaggac
aaagaatctgcgtatggaactgcttatgcagcatttggaggtgggctgaaggggaaggag
gcgtgccatgccattgctgctttgtgtgaagtttgctctatagactcactgatatccaac
ttcatcctccccttgcagggcagtcatatatcaggcaagaatgggcgcattcatggttct
cttaacatcaacacagaaactggccgcttatcagctcggaggcctagtttgcagaatcag
cctgctttagagaaagatcgctacaaaatccgccaggcatttgtcgctgcaccaggaaac
tcccttattgttgctgattacggacagctggaacttaggatccttgcacatcttgccaat
tgtaagagtatgttggatgccttcaaagctggcggagacttccattcaaggactgcaatg
aacatgtatccacacatttgtgaagctgttgaacaaaaaagcgtgcttcttgagtggcat
cctcaacctggtgaggataagcctccagttcctctattgaaggatgcttttgcttctgaa
agaaggaaagcaaagatgctcaacttttccattgcatatgggaaaacaccagtggggctt
tcccgagattggaaggtttctgtgaaagaagcaaaagaaacagttgctcgctggtacaat
gagagaaaagaagtgcggaattggcaggacgaacgtaagaaggaagcatgcagcaaaaaa
aggtgtgttcatacattgctaggacgggcccgtttgtttccttcagtggaccgagttacc
tcctctcaaagaggtcacattgaacgcgccgctatcaacacacctgtgcagggtagtgct
gccgatgttgccatgtgcgcgatgttagaaatattgaagaatttgcgtttgaaggagctt
ggatggaggctgcttttacaggtccacgatgaagtaatcctcgaaggaccgacagagtcg
gcagaggaagccaaggccatagttgttgagtgcatgtccaaaccatttgatggaaagaac
atcctcagggttgacctctccgtcgatgccaaatgtgctcaaaactggtattctgccaag
taa
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