Rhododendron vialii: 131330478
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Entry
131330478 CDS
T09330
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 32
KO
K14776
ATP-dependent RNA helicase DDX10/DBP4 [EC:
5.6.2.7
]
Organism
rvl
Rhododendron vialii
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rvl03009
]
131330478
Enzymes [BR:
rvl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
131330478
Ribosome biogenesis [BR:
rvl03009
]
Eukaryotic type
90S particles
Helicases
131330478
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
Helicase_C_2
Motif
Other DBs
NCBI-GeneID:
131330478
NCBI-ProteinID:
XP_058220060
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All DBs
Position
6a:complement(41017435..41023769)
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AA seq
753 aa
AA seq
DB search
MRPPKSRESRKQKRLSEAQEIELLESWIQNGRPESGSNPLSIPPPPKDAPVGRIDDGTFS
AYTGSQRFDQLPVSQKTKDGLKDAKFTKMTEIQRASLPHSLCARDILGAAKTGSGKTLAF
IIPVLEKLYRARWGPEDGVGSIIISPTRELAAQLFDVLKSVGKHHNFSAGLLIGGRKDID
TEKEHVNDLNILVCTPGRLLQHMDETPNFDCSQLQVLVLDEADRILDVGFKKALNAIVSQ
LPKHRQTFLFSATQTKSVQDLARLSLKDPEYLSVHEESITATPNRLHQTAMIVPLDQKLD
MLWSFIKSHLNSKILVFLSSCKQVRFVFEAFKKLHPGIPLKCLHGRMKQERRMGIYSQFC
ETRSVLFSTDVASRGLDFNKAVDWVVQVDCPEDVAAYIHRVGRTARYLSGGKSVLFLVPS
EMKMLEKLQEKKIPIQFIKANTKRLQPVSGLLAALLAKKDDKKEVDLRHLAHRAFITYLR
SIHKHRDKEVFDVTKLPIEEFSASLGLPMTPKIRFLNQKSKGKQVSGESSLREENYSKEN
LFELPRESPVTGKIEEDEEDEEEVDKDFLSAKETPHGGQGKSTDIADIEPGTRILKKKKL
KINVHRPLGTRVVFDDEGNTLPPLATLADRISGDGSVQLDEDRVSKRYANLREELKEEDK
EDKLLDRQRRKEKRMKEKMKRRRGRKDEDDIEGEEDLSGSDGDRTNKRSKKYFDSDSDDA
ESKRDKDSTINADSISLKEQEELALKLLSSMHS
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atgaggcctcccaaatccagagaatcacgcaagcaaaaacgactctcggaggcccaggaa
atcgagctgctcgaatcatggatccaaaacggacggcccgagtccggttccaacccgttg
tctatcccgccgccgccgaaggacgctcctgtcggccgaatcgacgacggcacgttctcg
gcctacaccgggagccagaggttcgatcagttgcctgtgtctcagaagacgaaagacggg
ctgaaagatgcgaaatttaccaaaatgaccgagattcagagggcgtcgctgccgcactcg
ctctgcgcccgcgatatcctcggcgcggcgaaaacggggtccgggaagaccctggctttt
ataataccggttctagagaagttatacagagcgagatggggtccagaggatggggttggc
agcattataatatctcctacaagggagttagctgcccagcttttcgacgtattgaagtct
gttggaaaacaccacaattttagtgctggccttctaattggtggtcgcaaagatattgac
acagagaaggagcatgtaaatgatctgaacatcctggtctgcactcctggcaggcttctt
cagcacatggatgagactccaaattttgattgttctcagctacaggttttggtccttgat
gaggcagatcgtatcctcgatgtgggatttaagaaggcattgaacgcaatagtttcacag
ctaccaaagcatagacaaacctttcttttctccgcaactcagacgaagtcagttcaggat
cttgcaagactcagtttgaaggatccagagtaccttagtgtgcatgaggagtccataact
gccactcccaatcgcttgcaccaaacagcaatgattgttccgcttgatcaaaaactggat
atgttgtggagctttataaagtcacatcttaattcaaagatccttgtctttctttctagc
tgcaaacaggtaagatttgtgtttgaagcattcaagaagctccatcctggaatccccttg
aaatgtcttcatggaaggatgaagcaggagagaaggatgggaatctattctcagttttgt
gagacacgttcagttctcttctcgactgatgtagcctcaaggggccttgattttaacaag
gcagttgattgggttgtccaggtggactgtccagaagacgttgcagcttacatacacaga
gttggacgtactgctcgatatcttagtggtgggaagtcagttttattcctggtgccctca
gaaatgaagatgcttgaaaagttacaggagaagaagatacccatccagtttatcaaggca
aacacaaaaaggctgcaacctgtttctggattgttggcagctttattagcaaagaaagat
gacaagaaggaagtagacttgcggcacctcgctcatagggcattcatcacgtacttgagg
tctatacataaacatcgggataaggaggtttttgatgttacgaaactccccattgaagaa
ttctcagcatcattgggcctgccaatgaccccgaaaatccgttttctgaaccagaaaagc
aaaggaaagcaagtgtcaggagaatcttctcttcgagaagaaaattatagcaaggagaac
ttgtttgagcttccgagagaaagtccagttaccggtaaaattgaagaagacgaagaagac
gaagaagaagtggataaagattttctttcagctaaggaaaccccccatggtgggcaagga
aaatcaactgacatagcagatattgagccaggaacacggattttgaagaaaaagaaactg
aaaattaatgtccacagaccattgggtacaagagttgtctttgacgatgaaggcaacaca
ctgcccccacttgcaacattagctgacaggataagtggcgatggctcagttcagcttgat
gaagatagagtaagtaaaagatatgcaaatttgagagaagagttaaaggaggaggacaag
gaagacaagcttctggatcgtcaacgtcgtaaagagaaacgaatgaaggagaagatgaag
agaagaaggggacggaaggacgaggatgatattgagggtgaggaggatctttctgggtca
gatggagaccgaaccaataaaagatcgaagaagtactttgatagcgacagtgatgatgct
gagagtaagagagacaaagatagcactatcaatgccgactctatttctttgaaagaacaa
gaggaactggctctcaagttgttgagttccatgcactcttaa
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