Rhododendron vialii: 131330498
Help
Entry
131330498 CDS
T09330
Name
(RefSeq) heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic-like
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
rvl
Rhododendron vialii
Pathway
rvl00900
Terpenoid backbone biosynthesis
rvl01100
Metabolic pathways
rvl01110
Biosynthesis of secondary metabolites
Module
rvl_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
131330498
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
rvl01006
]
131330498
Enzymes [BR:
rvl01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
131330498
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
131330498
2.5.1.29 geranylgeranyl diphosphate synthase
131330498
Prenyltransferases [BR:
rvl01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
131330498
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-GeneID:
131330498
NCBI-ProteinID:
XP_058220089
LinkDB
All DBs
Position
6a:complement(41162664..41163788)
Genome browser
AA seq
312 aa
AA seq
DB search
MARALSHYNGKSSFLSLSRSNPCHPSPSPFFTFKPMMVTMAHNSQSSSYWASIEEEIEDH
LKQAIPVRPPTAVFEPMNCLVFAAPKTKAPALCVASCELVGGRRAEAMDAASALHLMHSA
AYTHENLPLTDRPDAKPMIHHAYNPNIELLTGDGIVPFGFELLARDVGPAQNNLDQVLRV
IVEITRAIGSRGIVHGQYNEIQGTQSDDGELCNDEWIEYVCKKKEGELHACGAACGAILG
GGSEDEIEGLRKYGLYVGMIYGILNGVGRKEKGLVEVVEKLRALALEELESFKGSSNVES
ISSLVEVNIFNV
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atggcaagagctctctcacactacaatggcaaatctagtttcctttctctctctagatca
aatccctgccacccatcaccctcaccattctttactttcaagcccatgatggtcactatg
gcccacaacagccaatcatcttcttactgggcctccatagaagaagaaattgaggaccat
ctcaagcaggccatcccggtccggccaccaaccgccgtcttcgagcccatgaactgccta
gtctttgccgcaccaaaaaccaaggccccggccctatgcgtcgcctcttgcgagcttgtt
ggaggccgtcgggccgaagccatggatgcagcttccgcactccacctaatgcattcggcg
gcctatacccacgaaaaccttcctctaacagacaggcccgatgccaagcccatgatccat
cacgcttataacccaaacatagagcttctcacaggtgatggaattgtaccatttgggttt
gagttattggcccgtgatgttggcccggcccaaaacaatcttgatcaggtcttacgggtg
atcgttgagatcacacgtgccataggctcacgggggattgtccacggccaatacaacgag
atccagggaactcaatctgacgatggagaattatgcaatgacgagtggattgaatatgtg
tgcaagaagaaggaaggtgagctgcacgcgtgtggggccgcatgcggggccatactagga
ggtggaagtgaggatgagatagaggggttgagaaagtatgggctttatgttggcatgata
tacgggattttaaatggggtgggaagaaaagagaagggattggtggaagtggtagagaaa
ttgagagcattggctcttgaggaattggaaagtttcaagggtagtagtaatgttgagtca
atttctagtcttgttgaagttaatattttcaatgtttga
DBGET
integrated database retrieval system
