Rhododendron vialii: 131330512
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Entry
131330512 CDS
T09330
Name
(RefSeq) vacuolar protein sorting-associated protein 35B-like isoform X1
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
rvl
Rhododendron vialii
Pathway
rvl04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
131330512
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rvl04131
]
131330512
Membrane trafficking [BR:
rvl04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
131330512
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
Motif
Other DBs
NCBI-GeneID:
131330512
NCBI-ProteinID:
XP_058220112
LinkDB
All DBs
Position
6a:complement(2176232..2188998)
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AA seq
789 aa
AA seq
DB search
MITSGIEDEDKWLAEGIAGIQQHAFYMHRALDANNLREALKYSAQLLSELRTSRLSPHKY
FELYMRAFDELRKLEMFFKEQDRHGCSVADLYELVQHAGNILPRLYLLCTVGSVYIKSKD
APAKDVLKDLVEMCRGVQHPIRGLFLRSYLAQVSRDKLPDIVSECEGDADTIMDAVEFVL
QNFIEMNKLWVRMQLQGPVRVIEKRNKERNELRDLVGKNLHVLSQIEGIDLEMYKDTVLP
RILEQVVNCKDELAQYYLMDCIIQVFPDEYHLQTLETLLGACPQLQPTVDIKTVLSLLME
RLSNYAASSPELLPEFLQVEAFAKLSNAIGKVIEAQVDMPVVGAITLYVSLLTFTLRVHP
DRLDYVDQVLGACVKKLSGKAKLEDTKATKQVVALLSAPLEKYNDIVTALTLSNYPRVMD
HLDDGTNKVMAMVIIQSIMTNNTCISTADKVEVLFELIKGLIKDLDGTPVDELDEEDFKE
EQNSVARLIHMLYNDDPEEMLKIICTVRKHIMTGGPKRLPFTVPPLVFSALKLIRRLQGQ
DGEVDGEEVPATPKKIFQLLNQTVEALSYAQSPELALRLYLQCAEAANDSDLEPVAYECF
TQAFLLYEEEVADSKAQVTAIHLIIGTLQRMNVFGVENRDTLTHKATGYSAKLLKKPDQC
RAVYACSHLFWVDDQDGIKDGERVLLCLKRSLRIANAAQQMANVARGSSGPITLFVEILN
KYLYFFEKGNPQITGAAILGLIELIKNMQSDTTTPDRASDAFFASALRYIQFQKEKGGAM
GELYNSINV
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atgatcacgagcggtatcgaggacgaagacaaatggctcgccgaaggcatcgcaggaatt
caacaacacgctttttatatgcatcgcgcactggacgcgaacaatcttagggaagccctg
aagtactcggctcaattgttgtcggagctccgaacatccagactctctccccacaaatac
ttcgaactatatatgcgagctttcgatgaattgagaaagctcgagatgttctttaaagag
caagataggcacggttgttcggtagccgacctttacgaactcgttcaacatgcggggaat
attttacctagactgtatctcctttgcacagtaggatctgtgtacattaagtcgaaggat
gcccctgctaaggatgtgctgaaagaccttgttgaaatgtgtcgcggcgttcagcatcct
atccgtgggctctttttgaggagttatcttgctcaagtcagtagagataagttacctgat
atagtttccgagtgtgaaggagatgctgacaccatcatggatgctgtagaatttgtgctg
caaaacttcatagagatgaataaactttgggttcggatgcagcttcagggaccagtccgg
gtaatagagaaacggaacaaggagaggaatgagcttcgtgatctggttgggaagaatttg
cacgtcctgagtcagattgagggtattgaccttgaaatgtacaaagatactgtccttccc
agaattttggagcaggttgtcaattgtaaagatgagcttgcgcagtattatttaatggac
tgcataattcaggtctttccagatgagtaccacttgcaaactcttgaaacgttgttgggt
gcttgccctcaactccagccgacggttgacatcaagacagtgttatcactactgatggag
agactatccaactatgcagcttcaagtccagaactgttaccagaatttttgcaagtggaa
gcttttgctaagttaagcaatgccattgggaaggtgatagaagcacaggttgacatgcct
gttgttggtgccattactttgtatgtctctcttcttaccttcactctccgtgttcatcct
gatcggcttgattatgtggatcaagtactgggagcgtgtgttaagaaactttctggaaaa
gcaaaacttgaagatactaaagcaacaaaacaagttgttgcacttttgagtgctccgttg
gaaaagtacaatgatattgtaactgccctgacgctttctaattatccccgtgtgatggac
caccttgatgatggaacaaacaaagtcatggcaatggttataattcaaagcatcatgacg
aataacacttgcatttcgactgctgataaggttgaggtattgtttgaattgataaaaggg
cttatcaaggatctagacggaactccagtggatgagcttgatgaggaggatttcaaagag
gagcaaaattctgtagctcgccttatacacatgttgtataatgatgaccccgaggagatg
ttaaagattatatgtactgtgaggaaacatattatgactggaggtccaaaacgccttcct
ttcacagtcccccctcttgttttttctgcacttaagttgatcaggcgactgcaaggtcaa
gatggagaagtagatggagaagaagttcctgcaacaccaaagaaaattttccagctctta
aatcagaccgttgaggcgctttcatatgctcaatcacctgaactggcattacggctatac
ttgcaatgtgcagaggctgccaatgacagtgatctcgaaccggttgcttatgaatgtttc
actcaagcatttctattatatgaagaagaagttgcggattcaaaagcccaggtgactgca
attcaccttataattgggactctacagagaatgaatgtatttggtgttgagaatagggat
accttaacacataaggccacggggtattcagcaaagcttttgaagaagcctgatcaatgc
agagcagtttatgcatgttcgcatctcttttgggtggatgaccaagatggaattaaggat
ggggaaagggtcttgctttgcttaaagcgttcactaaggattgcaaatgctgcacaacaa
atggccaatgttgcacggggtagcagtggaccgattacactgtttgttgaaatactgaac
aagtacctctatttttttgagaagggaaatccgcagataactggtgctgcaattctgggg
ctaatagaactaataaaaaatatgcaaagcgacacaacaaccccagatcgagcttcagat
gctttctttgcaagtgcattgcgctacattcagtttcagaaagagaaaggcggcgcaatg
ggtgaattgtataatagcattaacgtgtga
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