Rhododendron vialii: 131330536
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Entry
131330536 CDS
T09330
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 39
Organism
rvl
Rhododendron vialii
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
Zn_ribbon_InsA
Motif
Other DBs
NCBI-GeneID:
131330536
NCBI-ProteinID:
XP_058220139
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Position
6a:complement(20623051..20634286)
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AA seq
671 aa
AA seq
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MGCGGRTLLSLSLCSSTSSTRFSLTLLSRFPLSNFPYPPPPLLPSAALVFRPLCSATAAT
TEEGLQPLKHSILLERLRIRHLKDSSSEKTRPTQRPLAPGDDDGSATKKNTNNNKKKKSE
VEVLASSFEELGLTEETMGALEEMGISAPTEIQSIGIPCVLKGKSVVLGSHTGSGKTLAY
MLPLAQLLRRDEALYGMLMKPRRPRAVVLCPTRELSEQVFRVAKSISHHARFRTTMVSGG
TRLRPQEDSLNTPIDMVVGTPGRVLQHIEEGNMVYGDIQYLVLDEADTMFDRGFGPDIRK
FLGPLKNRASKSDDKGFQTILVSATMTKAVQNLIDDEFQGIEHVRTSTLHKKIASARHDF
IKLSGSENKLEALLQVLEPSLAKGNKAMVFCNTLNSSRAVDHFLDENKISSVNYHGEVPA
EQRVENLQKFKSDDGDCPTLVCTDLAARGLDLNVDHVVMFDFPSNSIDYLHRTGRTARMG
AKGKVTSLVTKKDLMLATRIEQAIMKNESLESLTLDNVRRDVARSQITAEKNSKSMNISN
QKNKSKSPSLLKPSSVRRKFSSSEKTSGPKSGKASASSKTTQTPINVSKSPKFSAASSSK
RATSGGKKTTDSRKSGAVKSSAGSSKRAPSGGKKTTVSRKSGADFRTSKLNVVGFRGRSS
SSNARESLRSK
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgggttgtggtggaagaacgctccttagcctctctctgtgctcgtctacctcctcaacc
cgcttctctttaactctcctctcccgtttcccactctccaatttcccatatccgccacca
ccactactacccagcgccgccctcgtttttaggcccctatgctccgccaccgccgccaca
acagaggaaggactgcaacccttaaagcactcaatcctcctcgagaggcttcgaatcagg
cacctcaaggactcctcctccgaaaaaacccgaccgacgcagcggcctttggcgcctggg
gatgatgatgggtcggcgacgaagaagaatactaataataataagaagaagaaaagtgag
gttgaggttttggcttcgagtttcgaggagctagggttgactgaggagacgatgggggct
ttggaggaaatgggtatctcggctcctactgagattcagagtattgggataccttgtgtg
ctcaaagggaagagtgtggtgttgggttctcacactggctctggaaagacccttgcttac
atgttgcctcttgctcagttgttgagacgggatgaggccttatatggcatgctaatgaag
ccaagacgtcctcgagctgttgtgctatgccccacaagggagctttctgaacaggtgttc
cgcgtggctaagtcaattagtcatcatgctcgattcaggactaccatggtaagtggcggc
acccgtttaagaccccaagaagattcgttgaacaccccaattgatatggttgtggggacc
cctggtcgtgttcttcaacatattgaggaagggaatatggtttatggtgacatccaatac
ctggtgttggatgaagcagatacaatgtttgatcgtggctttgggcctgatattcgtaag
tttcttggccccttaaaaaatcgtgcatccaaatctgatgataaaggattccagacgatt
ttggtctctgcaactatgacaaaggcagtgcaaaacctgattgatgacgagtttcaagga
attgaacatgtgcgaacttcaacgttgcataagaagatagcatctgctcgccatgacttt
atcaaactttcaggttctgaaaataagctggaggcattgctacaggtcctcgagccaagc
ttagcaaagggaaacaaagcgatggtgttctgcaacacattgaattctagtcgtgctgtg
gatcactttctcgatgaaaataaaatctcttctgttaattaccatggagaggtgccagca
gaacaaagggttgaaaacctccaaaagtttaagagtgatgatggagattgccccacgttg
gtctgcacggacttggctgctcggggactggacttgaatgtggatcacgtcgttatgttt
gattttccctcaaattctattgactacctccatcggactggaagaactgctcgaatgggt
gctaaaggtaaggtgacaagtttagttacaaagaaagacttgatgcttgccacccgtatt
gagcaggctataatgaagaatgagagcttggaatccctaactttagataatgtaaggagg
gatgttgccaggtcccaaataacagcagaaaagaactcgaaatccatgaatatttcaaac
cagaaaaacaagagtaaatctccatctctgctgaaaccatcaagtgtccggaggaagttt
tcatcttccgaaaagacctcaggtccaaaatctggaaaagcttctgcttcatccaaaact
acacagactccaattaatgtgtccaagtcaccaaaattttcagctgcaagtagttcaaaa
agggctacttccggtgggaagaaaacaacagacagcagaaagtctggtgctgtgaaatca
tctgcaggtagttcaaaaagggctccttccggggggaagaaaacaactgtcagcagaaag
tccggcgctgatttcagaacatcaaaactaaatgttgtagggttcagggggcggagttcg
tcgtctaatgcaagagagtcattgagatctaagtaa
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