Rhododendron vialii: 131330737
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Entry
131330737 CDS
T09330
Name
(RefSeq) protein argonaute 16
KO
K11593
eukaryotic translation initiation factor 2C
Organism
rvl
Rhododendron vialii
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rvl03019
]
131330737
03036 Chromosome and associated proteins [BR:
rvl03036
]
131330737
Messenger RNA biogenesis [BR:
rvl03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
131330737
Chromosome and associated proteins [BR:
rvl03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
131330737
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
131330737
microRNA pathway
RISC loading complex
131330737
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
PAZ
ArgoN
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
131330737
NCBI-ProteinID:
XP_058220403
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All DBs
Position
6a:34167407..34194860
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AA seq
896 aa
AA seq
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MEKEVIGSPPPPPPIVPPNVKPEKLDVPKHSIIRRRGFGSAGRRISLLANHFKVSVKYPE
EMFYQYSVSVSYEDKRAVEHKGIGRKVFDKLYQTYSSELGEKKLAYDGEKTLYTVGPLPQ
NKLEFSVVLEESFAKKGSPAHSGSPTEATKRSKHSFQSKAFNVEISYAAKIPLKSVSLAL
QGAEAEKTQDALRVLDIILRQQAANRGCLLVRQSFFHDDSRNLTDIGGGVTGCRGFHASF
RPTLGGLSLNMDVSTTMILTPGPVIDFLLANQSARDPRNIDWTKAKKMLKNMRVKTRHNN
REFKIIGLSEKPCNQQFFPLKVRNSDGGKDGEALEITVYDYFTKQRNIELRFSQYMPCLD
VGKPKRPSYLPLELCSLVSLQRYTKALSSVQRASLVEKSRQKPPERIRVVTDAIKNYRYD
DDPLLAACGISIEKQLTQVDGRVLEAPKLKVGNNEDCVPRNGRWNFNNKHLFTPVKIERW
VVVNFSARCDTSHLSRELIQCGRNKGIHIERPHTLIEEDQQYRRSGPVIRVDKMFELITA
KLPGPPQFILCVLPERKNSDIYGPWKKKSLSDFGIATQCISPSKINDQYLTNVLLKINSK
LGGTNSLLALEHSSRIPLIKDTPTMILGMDVSHGSPGRSDVPSVAAVVGSRSWPLISRYR
AAVRTQSSKVEMIECLYKPLANGEDDGIMRELLIDFYQTSNGRKPAQIIIFRDGVSESQF
NQVLNIELDQMLKAYQHLGEAKVPKFTVIVAQKNHHTKLFQSGAPENVPPGTVVDTNIVH
PRNYDFYMCAQAGMIGTSRPAHYHVLIDEIGFSPDDLQNLIHSLSYVYQRSTCAISIVAP
ICYAHLAAAQMGQFIKFEDFSETSSGQKSLTTAGSAAAVPELPRLHKDVAGSMFFC
NT seq
2691 nt
NT seq
+upstream
nt +downstream
nt
atggagaaagaggttatcggatctcctccaccaccaccgccaattgtaccacccaatgtc
aagccagaaaaactggatgtgccgaagcattctattatccgtaggcgtgggtttggtagt
gctgggcggcgcatttcgttgttggcaaaccacttcaaagtctctgtcaaatacccggag
gagatgttttatcagtacagtgtttctgtaagttatgaagataagagagctgttgagcac
aagggaattgggagaaaggtttttgacaaactttaccaaacctactcctcagaacttggc
gagaagaagttggcttatgacggggagaagacgttgtacactgtggggcctcttccacaa
aataagttagagttctcagtggtacttgaggagtcttttgcaaaaaaaggtagcccagct
cacagtgggagtcctactgaggcaacaaaaaggtcaaagcattcttttcagtcgaaagct
tttaatgttgaaatcagctacgcagcaaaaatacctctgaagtcggtatctctagctctt
caaggagccgaagctgaaaaaacacaagacgcgctgcgagtgctagacatcatactgagg
cagcaagcggctaacaggggttgccttttggtacgtcagtctttctttcacgatgactca
agaaatttaactgacattggaggaggtgtgaccggctgtcgggggttccatgctagcttt
cgcccaactcttggcggtttgtctctgaatatggatgtatctaccactatgatcttaaca
cctgggcctgtcattgattttctgctagccaatcagagtgcacgggatcctcgaaatata
gactggacaaaggctaagaaaatgttgaaaaacatgagggtgaagacgaggcacaataac
cgggaatttaagatcataggcttgagtgaaaagccttgcaatcagcaattttttcctctg
aaagtgaggaatagtgatggaggtaaggatggagaggctttggagattactgtgtacgac
tattttacgaaacaacgtaacatagagcttaggttttctcaatacatgccatgccttgat
gttggcaaaccaaagcggccttcctatcttccactggagctttgctctcttgtctcgctt
cagcgctacacaaaggcattatcttcagtgcagagagcatctttagttgaaaagtcgagg
caaaaacctccggaaaggatacgggttgtgactgatgccattaaaaactaccgttatgac
gatgaccctcttcttgctgcttgcggcatttcgattgagaaacaacttactcaagttgat
ggtcgtgtccttgaggcccctaagttgaaggttggaaataatgaagattgtgtacctcgt
aatggaagatggaactttaacaacaagcatctctttaccccagtcaaaatagaacggtgg
gtggttgtcaacttttctgctcggtgtgatacaagtcatctctcccgagaacttatccaa
tgtggacggaacaagggcattcatattgaacgtccacacacactgattgaggaagatcag
caatatagaaggtctggccctgttatacgagtagataagatgttcgagctgataactgca
aaactccctggtcctcctcaatttattctttgtgtcttgcctgaacggaaaaattctgac
atttatgggccttggaagaagaagagtcttagtgattttggcatagccacccagtgtatt
tccccttctaagatcaacgatcagtatcttacaaatgtcctcctcaaaataaactctaag
ctcggagggacaaactctctgttggcacttgagcactcgtcccgcatccctctgatcaaa
gacactccaactatgattctggggatggacgtttctcatggctctcccggcagatccgat
gttccatcggtagcggcagttgttggatctcgctcatggccattgatatcaaggtataga
gcagctgtacggacccaatcatcgaaggtggaaatgatcgaatgtctgtacaagccctta
gcgaatggagaggatgatgggattatgagggaactactgattgatttctaccagaccagc
aatggaaggaaacctgctcaaataataatattcagggatggggtgagcgaatctcaattt
aatcaagtgctgaacattgagctggatcaaatgctgaaggcttaccagcaccttggtgag
gccaaggttcccaagttcactgtgattgtggctcaaaagaatcaccacacgaagctattt
caatcaggtgcccctgaaaacgttcctcctggtactgttgttgatacaaatattgtgcat
ccaaggaactatgatttctacatgtgcgctcaggcggggatgataggaacttctcgtcct
gcgcattatcatgtattgatcgatgagattggtttctctcctgatgaccttcagaatctt
attcactcactgtcatacgtgtaccaaagaagcacttgtgcaatctcaattgtggctcct
atctgctatgcacaccttgcagccgctcaaatggggcagtttatcaagtttgaggacttc
tccgaaacgtcttcgggacaaaagagcctcacaacagcaggaagtgctgccgccgttcct
gagcttccgaggttgcataaagatgttgcgggttctatgtttttctgctga
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