Rhododendron vialii: 131331087
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Entry
131331087 CDS
T09330
Name
(RefSeq) cyclic nucleotide-gated ion channel 1-like isoform X1
KO
K05391
cyclic nucleotide gated channel, plant
Organism
rvl
Rhododendron vialii
Pathway
rvl04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
131331087
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rvl04040
]
131331087
Ion channels [BR:
rvl04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
131331087
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Motif
Pfam:
Ion_trans
cNMP_binding
TrbL_3
IQ
Motif
Other DBs
NCBI-GeneID:
131331087
NCBI-ProteinID:
XP_058220898
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Position
6a:4672154..4681613
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AA seq
774 aa
AA seq
DB search
MKILDPRGPFLPKYWTKIVFWWFLLSNFFDYLFLYIPVIDDDKQCLGLDENLQTAAIVLR
TIFDVFYIIHMIFQFRTRFFNVPSASEIALRCSCTNFLIDVLAVLPLPQVFVLSIIPRMG
GSRSSNTRSFLRWVVYFQLLPRTCLKQRLYKEAKIPSGMFTGAAWDGAAFGLINYMCLSH
TAGATWYALSIDRGIMCWTKACGNRTECVNSFEYCDHSTGFKVFLNESCPIQTPNAALFD
FGIYLDAFQSGVLGSLNFREKFFYCFWWGLQNLSSLGQNLKTTTYSDEILLAMFVFMYGL
IYYSILSAEIQKFLRQRYKAMGLEERGVKMLEVEQWMSTRSLPASLRERIKQYEQYKWQK
TRGVDEENLIRNLPKDLRRDIKRHLGLDRLMRVPVFQRMDEQLLDALCDRLEQVFYTEGS
FVMQEGKPVDAMLFVMDGKLASSTTNGGSIGFFNMEYLERRDFGGEELLGWALDPHSSTK
LPFSTRTVKALSKVEALVLKADDLKIVASESRWSHDKQLRHFFRYYSQQWRTWAACFIQA
AWRRHRRKKLEESLRIIEENRLQDALARGGGSLPSLGAIIYVVRFAVNAIRAVRWNGSAQ
TPRLPERIFPTMIQKPAEPDFIAEDEETAAESDSTESGVAFEEGSKGKYAASSSEVPGLP
VPARSHPKRSRAEDERYDKLSTQLEETKTKLEEVGLATKTKLEEVGLAIKKLTDDRLNVN
DLYEEVMKTEGFDEPTLALAFDHLVENEKVAKAFIVKNARLRRVWLEGFLKTNA
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatccttgacccgcgaggtccatttcttccgaagtactggactaaaatagttttc
tggtggttcctgctttcaaattttttcgattatttgttcctttacattcctgtgattgat
gatgacaagcaatgccttgggttggacgaaaacctgcagactgcggcaattgttttgcgt
accatttttgatgtattttatatcattcatatgatctttcaattccgaactcgttttttt
aatgttccctctgcttcggaaatagcattgagatgttcgtgcacgaacttcctcattgac
gttcttgcagttcttcctctgccacaggtgtttgttttatctatcattccacgcatggga
ggttcaagatcttcgaatacacgaagctttttgcggtgggtggtttatttccaactttta
cctaggacatgtctcaaacaacgtttgtacaaagaagcaaaaataccttctggtatgttc
actggagctgcttgggatggcgctgcatttggtctcattaactacatgtgtctcagtcat
acagcgggagcaacttggtacgcgctttctatagaccgaggaattatgtgctggacgaaa
gcctgtggaaatcggactgagtgtgtaaactctttcgagtattgtgatcatagtacaggg
tttaaagtatttctgaatgagtcctgccccatacagacaccaaatgctgctctttttgat
tttggaatctacctcgatgcatttcagtccggtgttctaggatcattaaattttagggag
aagttcttttactgcttttggtggggcctgcaaaatctgagttctcttggtcaaaacctc
aagacaactacctattccgatgaaattttgttggcaatgttcgttttcatgtatggcttg
atatactattcaatcctcagcgcagagattcagaagtttctgcggcaacggtacaaagca
atgggattggaggaacggggagtcaaaatgcttgaagtagaacaatggatgtctactcgt
tcgctccctgcaagtctgagggagcgaatcaaacaatatgaacagtacaaatggcagaaa
actagaggtgttgatgaagagaatctgatccgtaatcttccaaaggatctaaggagggac
ataaagcgccatcttggtttggatcggcttatgagagtgccagtgtttcagcgcatggat
gaacaactgttggacgctttgtgtgaccgtctagaacaggttttctacacggaaggcagc
ttcgtcatgcaggaggggaaaccagttgatgcaatgctcttcgtaatggacgggaaatta
gcttcttcgaccactaatggtggaagtattgggttctttaacatggaatatcttgaacgc
agagacttcggtggagaagagcttcttggttgggctttagatccccattcctcaactaaa
ctcccattctcaaccagaacggttaaagccctctcaaaagtggaagcattagtcctaaag
gcggacgatttgaagattgtcgcctctgaatccaggtggtcacacgacaagcagctccgc
catttttttagatactactcgcagcagtggaggacttgggcggcttgtttcatacaagca
gcgtggcgacgacatcgcaggaagaagttggaagagtctcttaggatcatagaggaaaat
aggttgcaagatgcattggccagaggcggcggaagcttgccgagtttgggggccatcatt
tatgttgttagatttgccgttaatgccatccgtgccgtaaggtggaatggttcggctcag
acacccaggttgccggagagaatttttcccacgatgattcagaagccagcagagcctgac
tttattgcagaagatgaagaaaccgctgctgaatcagactcgactgagtctggtgttgcc
tttgaagagggatcaaaagggaaatacgcagcttcttcaagtgaggttccgggccttccg
gttccagcaagatctcacccaaagaggagtcgtgccgaagatgagcgttacgacaagtta
tctacacaacttgaagaaaccaagacaaaacttgaagaagtaggtttagcaaccaagaca
aaacttgaagaagttggtttagcaatcaagaaacttaccgatgatcgacttaatgtgaat
gacctctatgaggaagttatgaagacagaaggtttcgatgaaccgacacttgcattagca
tttgaccacttggttgagaatgaaaaggttgccaaggcgtttattgtgaagaatgcgaga
ctccgaagggtatggttggagggttttttaaaaacgaacgcgtga
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