KEGG   Rhododendron vialii: 131331214
Entry
131331214         CDS       T09330                                 
Name
(RefSeq) protein ROOT INITIATION DEFECTIVE 3
  KO
K14829  pre-rRNA-processing protein IPI3
Organism
rvl  Rhododendron vialii
Brite
KEGG Orthology (KO) [BR:rvl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:rvl03009]
    131331214
Ribosome biogenesis [BR:rvl03009]
 Eukaryotic type
  Pre-60S particles
   5-FMC complex
    131331214
SSDB
Motif
Pfam: WD40_Prp19 WD40 Beta-prop_EML_2 WD40_CDC20-Fz WD40_WDHD1_1st WDR55 Beta-prop_EML Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 EIF3I NBCH_WD40 ANAPC4_WD40 Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd WDR90_beta-prop_4th Beta-prop_VPS8 WD40_MABP1-WDR62_2nd Beta-prop_HPS5 WD40_MABP1-WDR62_1st Beta-prop_DCAF4 Beta-prop_IFT140_1st Beta-prop_IP5PC_F Beta-prop_WDR75_2nd Beta-prop_RIG_2nd Beta-prop_IFT122_1st Beta-prop_SCAP WDR54 Beta-prop_LRRK2 Beta-prop_Vps41 Beta-prop_WDR75_1st Beta-prop_WDR19_1st PEP5_VPS11_N
Other DBs
NCBI-GeneID: 131331214
NCBI-ProteinID: XP_058221083
LinkDB
Position
6a:complement(6184525..6191214)
AA seq 440 aa
MEPELVMASSQTDAGIGCWDLHSGAELLRYRSCASPSHGLVCVGGRFVASSQLREPSASS
GSVLYWSWNKAHAEVKNFPAEPINPLVSNSDGTYIVGGGVSGDIYMWEVPTGRLLRKWHA
HYRAVTCLVFSDDQSLLISGAEDGAVRVWSLLMIFDDMRREQAKHLYDYSFSEHTLRVTD
IATGYGGCNAIIVSASEDRTCKVWSLSKGKLLRNIVFPSIIDAIALDPGEHVFYAGGRDG
KIYIAALTAQGTSSNTYGMHIIGSLADHSKAVTCLAFSVDGVLLVSGYEDGMVRVWDTKT
HNIVRIFKHGKGPVNNILVVPWMLLNSQSSPIRRHGSSLPPPLEKYANSTDEIAEVKAYL
GTHGTSDEPLDASYVSVHTMNSQIEELQQQGSSAAAGMEVERLKLEYRRSMQMVQRWQKM
YENLHQLCLDELLDGDQAGG
NT seq 1323 nt   +upstreamnt  +downstreamnt
atggagccggaactggtgatggcttcgtcgcagacggacgccggcataggctgctgggac
ttgcactccggcgccgagctcctccgttaccggtcttgcgcctccccttctcacggtctc
gtatgcgtcggcggccgcttcgtcgcctcctctcagctccgtgagccctccgcctcgtcc
ggctccgtcctctactggtcctggaacaaggctcatgcggaagtcaagaattttccagca
gagccgattaatcctctcgtttctaatagtgacgggacgtatatagttggcggaggtgtc
tctggggatatttatatgtgggaggttccgacgggtagactgcttaggaagtggcatgct
cattacagagcggttacgtgcttggtgttttcggatgatcagtccttattgatttctggg
gcagaggatggagctgttagagtctggtcgcttctcatgatatttgatgatatgcggagg
gagcaagcaaaacacctctatgattatagcttctctgagcacactttacgagtgactgac
attgccacaggctacggtggatgtaatgcaattatagtgtctgcttcggaggatagaaca
tgcaaggtttggagcttatctaaggggaagctactgagaaatattgtattcccatcaata
attgatgcgattgcattggaccctggcgagcatgtcttttatgctggaggcagagacggc
aagatatacatcgctgcactcactgctcaaggcacctcgagcaacacttatggaatgcat
attattggttctttagctgatcatagtaaagctgtcacttgcttagcatttagtgtggat
ggagtgttgttggtttctggctacgaggacggcatggttcgagtctgggatactaaaact
cataacattgttcgcatcttcaaacatggaaaaggtcctgtaaacaatattcttgttgtt
ccttggatgttactgaattctcagtcttctcccataagaaggcatggatcttcattaccc
cctccactggagaagtacgcaaattcaacggatgagattgcagaagttaaggcttatctc
ggtacccatggtacttctgatgagcctctggatgcttcatacgtcagtgttcacactatg
aatagtcaaattgaagagctgcagcaacaaggctcttcagctgcagctggaatggaggtg
gaacgactaaagctggagtacagaagatctatgcaaatggtccagcggtggcagaaaatg
tacgaaaacttgcaccaactttgtctagatgagcttttggatggagatcaagctggaggc
tga

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