Rhododendron vialii: 131331322
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Entry
131331322 CDS
T09330
Name
(RefSeq) transcription initiation factor TFIID subunit 4b-like isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
rvl
Rhododendron vialii
Pathway
rvl03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
131331322
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rvl03021
]
131331322
03036 Chromosome and associated proteins [BR:
rvl03036
]
131331322
Transcription machinery [BR:
rvl03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
131331322
Coactivators
SAGA/TFTC/STAGA complex
131331322
Chromosome and associated proteins [BR:
rvl03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
131331322
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
RST
SPMIP10-like
DUF3347
DASH_Spc19
Motif
Other DBs
NCBI-GeneID:
131331322
NCBI-ProteinID:
XP_058221189
LinkDB
All DBs
Position
6a:complement(7811866..7820390)
Genome browser
AA seq
868 aa
AA seq
DB search
MDPSIMKLLEEDEDESMHSGAAVEAFTAALNRDIAGDTSTSQHSDSDTAASFSQGSNHLF
AQWQSSIHDANTDGHKGQDLNGSGQQEQHSSKMELKQQGSGPQSQQIDAHFSQTMFIPNS
EMNPIHITEPNREQNLESSQFSKKMNNQQAIVGEQAMNSVKSGKQVPFGMLLPILVPQLD
KERGMQLNTLYMKLKKNEISKMGFVRHMKAIVGDHMLKMAVCKVQVQAQKSQAGPNQSPL
QSQASAQPQHLKMPSVGANQGTVLLSHVPSSAAQQTSYSTNAMTNSNVEKSLEMEWKSDS
SAMPASQTSISRLSNINQEREHPTIPIQGLSKLQQQHLHFSPPSFAIDGSKSGNYHQFSG
SNVSTSASSLKQQPHDSLTRQGPTQVTNVLSVPKFERPNSVIGSKRVQVGTLMPHNWPSS
TTKDQKNDAISSMTFIKEEPVDQGSSDKQLKSRHGLSSLPPSKEEQRNITSGTSSDNFPT
SRCTAPSNSVPSPMTNQLDPSILSNSPIPSATSPAGPKSSQETPPIKTFMGQKKPLESLC
SSPPPPSKKQKVSGPFLDESIEQLNDVTAVSGVNLREEEEHLFSGPKEDNRVSEASRRVV
QEEEERLILQNIPLREKVAEIIAKCGLMSISNDVERCLSLCVEERLRGLISNLIRLSKQR
VDIEKPRHRTLITSDVQQQITAINQKARAELDKKQTEAEKLQNLYEPEGGVDGDKDEGRV
KSFKANKEEDDKMRTTAANVAARAAVGGDDMLSKWQLMAEQARQKRGGGDVFSGSQPGTD
LSRKPLSTSQNTETGNQEAEKRGHQTDAVTFGLSRKFARNQGMVPHSKVNPSISIKDVIA
ALEREPQMLKTTLIYRLYEKARANVVAK
NT seq
2607 nt
NT seq
+upstream
nt +downstream
nt
atggacccttccattatgaaactcctcgaagaggacgaggacgaatcaatgcattctggg
gcggctgttgaggcgttcacggccgctctgaacagggacatagcgggggatacgtccaca
tcacaacattctgattcagacactgcagcatctttttctcaaggaagcaatcacttgttt
gcacagtggcagtcttccatccatgatgcaaacaccgacggtcacaaagggcaagatttg
aatggttcggggcaacaagagcaacattcctccaaaatggagctcaagcaacaagggtct
ggtcctcagagtcagcaaattgatgcccatttttcacagacgatgtttattccaaattct
gagatgaatccaatccatattacagagccaaacagagaacaaaatctggagagttctcaa
ttctcaaagaagatgaataatcaacaggcaatcgtaggagaacaggcaatgaattcagtg
aaaagtggaaaacaagtgccgtttggtatgttgctcccaatcctagtaccccaacttgat
aaggaaagaggcatgcaactaaatactctttatatgaaattgaagaaaaatgaaatctcc
aaaatgggatttgtccggcacatgaaagctattgtaggggaccatatgctcaagatggct
gtatgtaaggtgcaagtgcaggctcaaaaatcacaggctggacccaaccaatcgccatta
cagtctcaagcttcagcacaaccacagcacctgaaaatgccatccgttggagcgaatcag
ggaactgttctcctgtctcatgttccctcttcagctgcacaacaaactagttattcaacc
aatgcaatgacaaatagtaatgttgaaaagtccctagagatggaatggaaatcagattca
agtgcaatgccagcaagccaaacttctatatccaggttgagtaacataaaccaagaacgg
gaacaccccacaattcccatacaaggactgagcaagctgcagcaacagcatctgcacttc
tcaccgccatcttttgccatagatggaagtaaaagtggtaattatcatcaattttctgga
tcaaatgttagcacttcagcatcttctctcaaacagcagccccatgattcactaacgagg
cagggtccaactcaggtcacgaatgtgttgagtgttcctaaatttgagaggccaaattct
gttattggatcgaagagagtgcaggttggaacccttatgccacataattggccatcatca
accaccaaagaccagaaaaatgatgctatatcatctatgacatttattaaagaagagcct
gttgatcaggggagtagtgataaacaactaaaatcgcggcatgggttgtcgtctctccct
ccttcaaaagaggaacaaaggaatataacttctggaacttcatcagacaacttcccaaca
tctagatgtacagcgccttctaattcagtgccttctcctatgacgaaccagctggacccc
agtatcttgtcgaactctccgatcccatctgcaacatctccggctgggcctaaaagtagt
caagagacacccccaataaagacttttatgggccaaaagaaaccacttgaatccctttgt
tcttcgccgcctccaccaagtaagaagcaaaaagtatctgggcccttcctggacgaaagc
attgaacaactcaatgatgtaactgccgtcagtggagtcaatcttagggaagaggaagaa
catctgttttctgggcccaaagaagataatcgagtttcagaagcatctcgaagggttgtg
caagaagaagaagaaaggctgattttgcagaacattccccttcgggaaaaagtggcagaa
atcattgcaaaatgtggtctaatgagtataagcaatgatgtggagcgatgcttgtcattg
tgtgttgaggaaagattgcgtggactgataagtaatctgatcagactgtcaaaacagcgg
gttgatatagagaagccaaggcacagaactcttatcacctcggatgttcaacaacaaatc
acggcaattaaccaaaaagcgagggcagaattggataaaaaacagactgaagccgaaaaa
ctccaaaacctctatgaaccagaaggtggtgttgatggtgacaaggatgaaggtcgtgtg
aaatcattcaaggcaaacaaagaagaggatgacaaaatgcggacaactgctgcaaatgtt
gcagctcgagcagctgttggaggagatgatatgctctcaaaatggcagctaatggctgag
caggcacgccagaaacgtggaggaggtgatgtgttttctggttctcaacctggtactgac
cttagccgcaagcctttatcaacctctcaaaatactgaaacgggtaatcaagaagcggag
aaaaggggtcatcaaactgatgctgtgacatttgggttgagtaggaaatttgcaaggaac
caaggcatggtgcctcactctaaagtgaatccttccatctccattaaggatgtcatcgcc
gccctcgaaagggagccccagatgttaaaaactacattgatatatcgcttgtatgaaaaa
gcccgtgctaatgttgtcgctaaataa
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