Rhododendron vialii: 131331341
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Entry
131331341 CDS
T09330
Name
(RefSeq) probable rhamnogalacturonate lyase B isoform X1
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
rvl
Rhododendron vialii
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
131331341
Enzymes [BR:
rvl01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
131331341
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GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
CarbopepD_reg_2
Big_6
Endotoxin_C
Motif
Other DBs
NCBI-GeneID:
131331341
NCBI-ProteinID:
XP_058221211
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Position
6a:9962859..9970779
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AA seq
673 aa
AA seq
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MVTSSGSMFKNSLEGFLKISVVVIIVWLSSPAMSNTAVQLDVQDDQVVIDNGIFQLTLSN
PGGIVTGIRYGGIDNLIELRNKDLNGGFWDLNWSESGSPGTRGKFDTIEGTSITVVVENE
EQVELSFTRIWDPSLQGKQAPLKIDKRFVVLRGCSGFYSYAIFEHLEDMPAFIINTTRIA
FMLNKDKFHYMVVADNRQRFMPDPEDRFPNRSQVLAYPEAVLLVDPLEPEFQGEVDDKYQ
YSCEDKDNRVHGWISFDPPVGFWQITPSNEFRTGGPFKQDLTSHVNPTTLAIFVTSHYAG
ADLVVKFEAGEIWKKVYGPVFIYLNSVPDKNEGLSLWDNAKEQMNIQVQSWPYNFPASED
FPLSNQRGILSGRLLVQDRYISKQIMPAKGAYVGLAAPGDVGSWQRECKGYQFWTRTDEA
GYFTIEGIRAGDYNLYASVPGFIGDYRYDVVIKITAGEAIETGDLVYGPPRDGPTLWEIG
VPNRSAAEFYVPDPNPMYINKLYVNHPDRFRQYGLWERYADLYHDDDLVYTIGVSDYKKD
WFFAQVTRKISEKTYKGTTWQIKFKLGTMDQNGTYKLRLALASAHNSELQVRVNDAEANP
PLFSTGEIGKDNAIARHGIHGLYWLFNVEVPSAQLMQGDDKINTIYLTQTRHTSPFQGIM
YDYIRLEGPSAST
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atggtaacatcatcaggttccatgttcaagaattcattggaaggtttcttgaaaatctca
gtggttgtgatcatagtttggctctcgagtccggcaatgtcaaataccgcggtgcaactg
gatgtacaagatgaccaggtggtgatagacaatggcatattccaactcacactgtcaaat
cccggaggaattgtgactggaatcagatacggtggaattgacaacttgattgaactccgt
aacaaagacttgaatggagggttctgggatcttaattggagcgaatcaggaagtccagga
acaaggggaaagttcgatacgattgaaggaacaagtattacagttgtagtggaaaatgag
gaacaggtggagctatcattcacaagaatctgggatccctcactacagggcaagcaggcc
cccttaaagatagacaaaaggtttgtagtccttcgtggttgctccggattttactcctac
gccatttttgaacacttagaagacatgcctgctttcatcattaacactaccaggattgca
ttcatgctcaacaaggacaagtttcactacatggtggtagcagataacagacaaagattc
atgcccgatccagaggaccggttcccaaacagaagccaagtattggcctacccagaagca
gtcctacttgtcgacccattggagcctgaatttcaaggagaagtggatgacaagtaccag
tactcttgtgaggacaaagataatcgggtccatgggtggataagctttgacccacccgtt
gggttctggcaaatcactcccagtaatgagttccgaacgggtgggcccttcaagcaagac
ctaacctcccatgtcaaccctaccacccttgctatatttgtaacttctcattatgcggga
gctgatcttgtagtgaaatttgaagctggtgagatatggaaaaaggtttacgggccagtt
tttatatatcttaactctgtgccagacaagaatgaggggctttctctttgggataatgca
aaagaacagatgaacattcaagtccaaagctggccttataatttcccagcttctgaggat
tttccactttctaatcagaggggcatattaagtggcagattactagtccaagacaggtac
atcagcaagcaaatcatgccagcaaagggtgcttatgtgggattggctgcaccaggagat
gttggatcttggcaaagagaatgcaaggggtaccaattctggacaagaacagatgaagca
gggtattttaccatcgagggtatacgtgcaggcgactataatctgtatgcatcggtccct
ggtttcattggagattaccgatatgatgtcgttataaaaataactgcaggggaggcaatt
gaaacaggtgatcttgtatatgggcccccaagagacggtcccacattgtgggaaatcggc
gttcccaatcgttccgccgcagaattctatgttcccgatccaaatccaatgtatataaac
aaactttatgttaaccatccggacaggtttaggcagtatgggttgtgggagaggtatgct
gatttatatcatgatgatgatctagtgtacactattggagttagtgattataagaaagat
tggttctttgctcaagtaaccaggaaaataagtgaaaaaacatacaaaggaactacatgg
caaatcaagttcaaacttggcaccatggatcaaaatggaacctacaaattgagactagca
cttgcatctgcacataattcagaattgcaggtccgggttaatgatgcagaagcaaatcca
cctctattttcaactggagagattgggaaggataacgcaattgcaaggcatgggattcat
gggctctattggctgttcaatgtggaggtgcccagtgctcaactaatgcaaggagatgac
aaaataaataccatttacctaacacaaacaaggcacaccagtcctttccaagggattatg
tatgattatattcgcttggaaggtccttctgcttctacttag
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